Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2 269 3e-67 seq4 158 1e-33 >seq2 Length=2999908 Score = 269 bits (298), Expect = 3e-67 Identities = 526/775 (68%), Gaps = 14/775 (2%) Strand=Plus/Plus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254 ||||| || || | ||||| ||||| ||| || | | ||| ||||||||| || Sbjct 497459 ATGCGTGTTTCCGTCGGTATTCACGGCGACAACATCGAGAAGGTCATCGAGACGTACAAC 497518 Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314 | ||| | ||||| ||||||||| | || || || |||||| | || || | Sbjct 497519 CTCATGTCGGAGCGTTACTTCACGCACGCCTCACCGACGCTCTTCAACTCGGGCACTCCT 497578 Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374 ||| | ||||||||| |||||||| || || |||||||| ||||| |||||||| ||| Sbjct 497579 CACGCCCAGATGTCGTCTTGCTTCCTCGTCGCCATGAAGGAGGACTCCATCGACGGTATC 497638 Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434 ||||| || |||||| || || || ||||||||| | | ||||| |||||| ||||| Sbjct 497639 TACGACACCCTCAAGACCTGCGCGCAGATCTCCAAGACGGCCGGTGGCATCGGTCTCCAC 497698 Query 53435 TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGA 53494 | ||| |||| || || ||| | || || || |||||| | | | || Sbjct 497699 ATCCACAACATCCGCGCCAAGGGCTCGTACATTGCTGGCACCAACGGCTACTCGAACGGT 497758 Query 53495 ATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGG 53554 ||||| ||||||||||| | || | || || || || |||||| |||||||||| Sbjct 497759 ATCGTTCCTATGCTCCGTGCCTACGACGCTACTGCTCGTTACGTCGACCAGGGTGGCAAC 497818 Query 53555 AAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTT 53614 |||||| || | |||||||||||||| ||||| ||||| |||||||| | || || Sbjct 497819 AAGCGCCCTGGTGCCTTCGCCATCTACCTTGAGCCCTGGCATGCCGACATCTTCGACTTC 497878 Query 53615 CTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACAGC 53673 ||||| || || ||| || || | || ||| | || ||||||||| || ||| || Sbjct 497879 CTCGACCTCCGCAAGAACCACGGAAAGGAGGAGGTTCGTGCCCGTGACCTCTTCTAC-GC 497937 Query 53674 TCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGAT 53733 ||| ||||| | |||||||||||| | || ||| |||| || ||| ||| || Sbjct 497938 TCTCTGGATCTCCGACCTCTTCATGAAGCGTGTCGAGTCTGACGGTGACTGGACCCTCAT 497997 Query 53734 GTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTA 53793 |||||| ||||||||||||||| || || || |||||||| | || |||| Sbjct 497998 GTGCCCCGCTGAGTGCCCCGGCCTCTCGGACGTTCACTCCGAGGAGTTCGAGAAGCTGTA 498057 Query 53794 TCGGACGTAC------GCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGT 53847 || ||| || | |||| ||| |||| ||||||| | || | Sbjct 498058 CGAGAGCTACGAGCGTGCCGGCAAGGGTCGC------AAGACCATCAAGGCCCAGAAGCT 498111 Query 53848 ATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGA 53907 ||| || |||||| | |||| ||||| || || | |||| ||||||||| Sbjct 498112 GTGGTTCGCCATCCTCGAAGCCCAGACCGAGACCGGTGGCCCCTTCATGCTCTACAAGGA 498171 Query 53908 TTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCGAGCAAC 53962 | | ||| ||| |||||| || || ||||| |||||| ||| |||| Sbjct 498172 CGCTGCAAACCGCAAGTCGAACCAGCAGCACCTCGGCACCATCAAGTCGTCCAAC 498226 Score = 113 bits (124), Expect = 5e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787 |||||| || ||| ||| || |||||||| | |||||| | | |||||| | || Sbjct 498975 TCAAGGCCATCTACAAGACTGTCTGGGAGATCTCGCAGAAGGCTGTCATTGACCTCGCTG 499034 Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847 | || ||||| |||| ||| |||||||| ||||| || |||||| | | | ||| || | Sbjct 499035 CCGACCGTGGCGCGTTCATTGACCAGTCTCAGTCGCTCAACATCCACCTTGCGAACCCCT 499094 Query 55848 CACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907 | | | || | | ||||||||||| ||||| |||||| ||||||||||| ||| Sbjct 499095 CGTTCTCGCAGCTCACGTCGATGCACTTCTACGGCTGGAAGCGTGGACTCAAGACTGGTG 499154 Query 55908 TGTACTATCTGCGGACCCGC 55927 ||||| || || |||||| Sbjct 499155 CCTACTACCTCCGCACCCGC 499174 Score = 87.8 bits (96), Expect = 2e-12 Identities = 181/267 (68%), Gaps = 2/267 (1%) Strand=Plus/Minus Query 74625 ATGCCGATGAGTTTGCACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCC 74684 |||||||| || |||||||| || || || | |||||| |||| | ||| | | Sbjct 2063499 ATGCCGATCAGAGCACACGGCAGCGCGTCCGTCAAAAACTCCTTCTCAATATCGAGCGAC 2063440 Query 74685 CATTGGACAATCTTGTGAATGTCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC 74744 || |||||| ||||| || | | |||||| | | | || || ||| || Sbjct 2063439 TCTTTGACAATGGCGTGAACTTCCTCTTGCGAGCACTTGTGCTTGAGATGGCTGTACAGA 2063380 Query 74745 -GTCACGGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGA 74803 | || ||| || || |||| || ||||||| || || | || ||||| || | Sbjct 2063379 AGACA-GGCGAAGTCGGTATGCAGACCCTCATCTCGACTGATGAGCTCGTTCGAGAAAGT 2063321 Query 74804 AAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAA 74863 || || |||| || ||||||||||||| ||||||||| || ||| || || ||| Sbjct 2063320 GAGCCCCTGCATGAGACCACGCTTCTTCAGCCAAAAGATTGCCGCGAACGACCCGGAGAA 2063261 Query 74864 GAAGATGCCTTCGACACACGCAAAGGC 74890 ||| |||||||| ||||| ||||| || Sbjct 2063260 GAAAATGCCTTCCACACAAGCAAACGC 2063234 >seq4 Length=2739924 Score = 158 bits (174), Expect = 1e-33 Identities = 312/455 (69%), Gaps = 10/455 (2%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 ||||| |||||||| || || ||||| || || | ||| || || ||||| | |||| || Sbjct 2540311 CCAGTACCGATACCGTCGGCTCCATTGATAAGGACCATGGGAACAACAGGCATGTAGTAC 2540370 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 |||||||| | ||| | ||||| || | || ||||| | ||| | ||| || Sbjct 2540371 TCAGGCTCGATTTGCTGTCCGTCTTCGAACAGGTTGTTGAGGATCGCGTCATCAGCGGGG 2540430 Query 117272 TCGAATATGTT---CTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCA 117328 | ||| ||| | | || ||| || | || |||||||||||||||| || ||| Sbjct 2540431 TGGAAGATGGTGCGCGTGATCCGGGGA---ATGCTCGTGAAAATGTAACGAGCACTGGCA 2540487 Query 117329 GCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGG 117388 |||||||| ||||| ||||| |||||||| || || | ||| | | ||||| | Sbjct 2540488 GCATCCTTACCACCCTGCAGACGAGTACCGAACTGACCGTTGGGCGAGAGCAAGTTCACG 2540547 Query 117389 TTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCA 117448 |||||| || || ||| | ||||| | ||| ||||| | ||| ||| ||| Sbjct 2540548 TTGTTGCTACCGACGAAGCTCTGAGCAAGAGAGACGATCGTGGAGTAGAGTGACGCTTCA 2540607 Query 117449 CCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCG-CCAGCTGAGCCACCTTCATGTC 117507 || ||||| ||||||| | ||| || || ||| | | ||| |||||| || | Sbjct 2540608 CCGTGGTGGTACGCCGCGTTGTCCATGAC-AAGACCGACGACCTGTTGCACCTTGATCTG 2540666 Query 117508 TGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACC 117567 | | | |||||||||| || | | | ||||||||||||| |||||| ||||| Sbjct 2540667 GTTCTTGATCTTCTTCTTGAAACAAGAGAAGACGACCTTGCGCTGACCTGGCTTGAGACC 2540726 Query 117568 ATCCGCCACGTGAGGG-ATCGAACGCTTGATGTCC 117601 |||||| || ||||| || ||||| || ||||| Sbjct 2540727 ATCCGCGAC-AGAGGGAATGGAACGAATGTTGTCC 2540760 Score = 118 bits (130), Expect = 1e-21 Identities = 296/450 (66%), Gaps = 0/450 (0%) Strand=Plus/Plus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || |||||||| || || || || |||| || | ||| || |||| ||| ||| || Sbjct 2540311 CCAGTACCGATACCGTCGGCTCCATTGATAAGGACCATGGGAACAACAGGCATGTAGTAC 2540370 Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGGA 151995 || ||||| | || || ||||| || | || || || | | | | ||||| || Sbjct 2540371 TCAGGCTCGATTTGCTGTCCGTCTTCGAACAGGTTGTTGAGGATCGCGTCATCAGCGGGG 2540430 Query 151996 TCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCGCA 152055 | ||| || || || || | | | |||||| ||||| || | ||||| ||| Sbjct 2540431 TGGAAGATGGTGCGCGTGATCCGGGGAATGCTCGTGAAAATGTAACGAGCACTGGCAGCA 2540490 Query 152056 TCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTG 152115 ||||| ||||| ||| || || || ||||| || |||| ||| | ||| | |||| Sbjct 2540491 TCCTTACCACCCTGCAGACGAGTACCGAACTGACCGTTGGGCGAGAGCAAGTTCACGTTG 2540550 Query 152116 TTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACCG 152175 ||| || ||||| ||||||| | | || |||||| | || |||||||||| Sbjct 2540551 TTGCTACCGACGAAGCTCTGAGCAAGAGAGACGATCGTGGAGTAGAGTGACGCTTCACCG 2540610 Query 152176 TGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCGTC 152235 ||||| ||||||| | ||| || || | | ||| |||||| || | || Sbjct 2540611 TGGTGGTACGCCGCGTTGTCCATGACAAGACCGACGACCTGTTGCACCTTGATCTGGTTC 2540670 Query 152236 GTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCGTCC 152295 | | |||||||||| ||| | | | | ||||||||||| ||| || | ||| ||| Sbjct 2540671 TTGATCTTCTTCTTGAAACAAGAGAAGACGACCTTGCGCTGACCTGGCTTGAGACCATCC 2540730 Query 152296 ACCACGTGAGGAATCGAACGCTTGATGTCC 152325 | || ||||| ||||| || ||||| Sbjct 2540731 GCGACAGAGGGAATGGAACGAATGTTGTCC 2540760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215876876400