Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq2 306 4e-78 seq6 167 3e-36 seq4 141 1e-28 seq3 132 5e-26 >seq2 Length=2999908 Score = 306 bits (338), Expect = 4e-78 Identities = 703/1048 (67%), Gaps = 17/1048 (2%) Strand=Plus/Minus Query 80715 CATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA 80774 |||||| ||| || || ||||| || |||| ||| || ||||||||| ||||||| Sbjct 498487 CATGAAAGTGTCGGCAAGACCCTGGACACCGAGACCGACGGGACGGTGGCGCATGTTCGA 498428 Query 80775 -TCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTG 80833 | || | |||| || | ||||| |||| ||| || ||| ||||| | | Sbjct 498427 GTTGCGAG-CCTCAGGGACGGGGTAGTAGTTGCGGGTGATAACCTGGTCAAGGTTCCTGG 498369 Query 80834 TAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAA----TTGGTTCCCCT-TCA- 80887 | || ||| || | || || || |||| |||| | | ||| || | ||| Sbjct 498368 TGACGACCTTGGTGATCTCGTGGAGCTTCTTGAAGTTGTAGGTCTTGTTTTCGAAGTCAA 498309 Query 80888 CAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAA 80947 | || || ||||| | || || || ||||| ||||| ||||| |||| | Sbjct 498308 CGAAGGCAGGAAGAGCGATCGAGGCAAGGTTGCAGACGGCGACCTCGTCAGGCGAAGAGT 498249 Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007 |||| | ||| || ||||| | || || ||||| || || || |||| | |||||| | Sbjct 498248 ACTCAATGATCTCAGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTCG 498189 Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067 ||||| ||| ||||||||||||| |||| | ||| |||||||||| ||| | | Sbjct 498188 ACTTGCGGTTTGCAGCGTCCTTGTAGAGCATGAAGGGGCCACCGGTCTCGGTCTGGGCTT 498129 Query 81068 TGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCA 81127 |||||||||| ||| | || | ||||||| |||||| ||||| | | Sbjct 498128 CGAGGATGGCGAACCACAGCTTCTGGGCCTTGATGGTCTTGCGACCCTTGCCGGCACGCT 498069 Query 81128 CATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCAC 81186 | || | |||| |||||| ||||||| | ||||| || | |||| | |||||| Sbjct 498068 CGTAGCTCTCGTACAGCTTC-TCGAACTCCTCGGAGTGAACGTCCGAGAGGCCGGGGCAC 498010 Query 81187 TCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCA 81246 || |||||||| ||| |||||| ||| ||| ||| ||||||||| ||| Sbjct 498009 TCAGCGGGGCACATGAGGGTCCAGTCACCGTCAGACTCGACACGCTTCATGAAGAGGTCG 497950 Query 81247 GGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGG 81306 | ||||||||| ||| ||| ||||| ||| || ||||||| | || ||||| | Sbjct 497949 GAGATCCAGAGAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCGTGGTTCTTG 497890 Query 81307 CGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGAC 81366 || | ||||| ||||| | |||||| |||||||| ||||| || || | ||||| | Sbjct 497889 CGGAGGTCGAGGAAGTCGAAGATGTCGGCATGCCAGGGCTCAAGGTAGATGGCGAAGGCA 497830 Query 81367 CCCTTGCGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAAC 81423 || ||| | |||||||||| ||||||||| ||||| |||| | |||| | | Sbjct 497829 CCAGGGCGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTAGCGTCGTAGGCACGGAGC 497770 Query 81424 ATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGC 81483 ||||| | |||||| | || | ||||| || || | || ||| ||||||||||| Sbjct 497769 ATAGGAACGATACCGTTCGAGTAGCCGTTGGTGCCAGCAATGTACGAGCCCTTGGCGCGG 497710 Query 81484 ACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTC 81543 | ||| ||| |||||||||||||| | | ||| || ||||| || || || Sbjct 497709 ATGTTGTGGATGTGGAGACCGATGCCACCGGCCGTCTTGGAGATCTGCGCGCAGGTCTTG 497650 Query 81544 ATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGAC 81603 | ||| || || || || |||||| || | |||||| | | | ||| || ||| Sbjct 497649 AGGGTGTCGTAGATACCGTCGATGGAGTCCTCCTTCATGGCGACGAGGAAGCAAGACGAC 497590 Query 81604 ATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAAC 81661 ||||| ||| | ||| || | ||||| || || || | ||||| |||| |||| Sbjct 497589 ATCTG--GGCGTGAGGAGTGCCCGAGTTGAAGAGCGTCGGTGAGGCGTGCGTGAAGTAAC 497532 Query 81662 GGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGA 81721 | | ||||| |||| || || || |||| || | ||| ||||||||||||| Sbjct 497531 GCTCCGACATGAGGTTGTACGTCTCGATGACCTTCTCGATGTTGTCGCCGTGAATACCGA 497472 Query 81722 TAGCTACACGCATAAACATGTACTGGGG 81749 | |||||||| | ||||| |||||| Sbjct 497471 CGGAAACACGCATCAGCATGTGCTGGGG 497444 Score = 105 bits (116), Expect = 8e-18 Identities = 185/267 (69%), Gaps = 2/267 (1%) Strand=Plus/Plus Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTA 64785 || ||||| ||||||||||| |||||||| || ||||| ||| | || || ||||| Sbjct 2063234 GCGTTTGCTTGTGTGGAAGGCATTTTCTTCTCCGGGTCGTTCGCGGCAATCTTTTGGCTG 2063293 Query 64786 AAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAG 64845 || ||||| || || |||| || || | || ||||||||||| ||| ||| || ||| Sbjct 2063294 AAGAAGCGTGGTCTCATGCAGGGGCTCACTTTCTCGAACGAGCTCATCAGTCGAGATGAG 2063353 Query 64846 GGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAGGACAAACCATCACAT 64905 || || || || || || | |||| |||||| |||||| |||| || || Sbjct 2063354 GGTCTGCATACCGACTTCGCCTGTCTTCTGTACAGCCATCTCAAGCACAAGTGCTCGCAA 2063413 Query 64906 G-GGACTATAATTGATATAGTAAAATCGGCTGTAGAAATTGAAAAGGAATTCATTACTGC 64964 | ||| | | | || || ||| | | | || ||||| ||||| || | || | Sbjct 2063414 GAGGAAGTTCA-CGCCATTGTCAAAGAGTCGCTCGATATTGAGAAGGAGTTTTTGACGGA 2063472 Query 64965 CGCGCTTCCGTGTCGTCTCATCGGCAT 64991 |||||| |||||| ||| |||||||| Sbjct 2063473 CGCGCTGCCGTGTGCTCTGATCGGCAT 2063499 Score = 86.0 bits (94), Expect = 7e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 80035 CGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATA 80094 || || || || ||||| || |||||||| || |||||||||||| | |||||| Sbjct 499173 CGGGTGCGGAGGTAGTAGGCACCAGTCTTGAGTCCACGCTTCCAGCCGTAGAAGTGCATC 499114 Query 80095 GAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAG 80154 || |||||| || | | ||||||| | | | |||||| || ||||||||||| Sbjct 499113 GACGTGAGCTGCGAGAACGAGGGGTTCGCAAGGTGGATGTTGAGCGACTGAGACTGGTCA 499054 Query 80155 ATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACT 80214 ||||| || ||||| || || || | ||||| | | ||| || | || ||||| || Sbjct 499053 ATGAACGCGCCACGGTCGGCAGCGAGGTCAATGACAGCCTTCTGCGAGATCTCCCAGACA 498994 Query 80215 GT 80216 || Sbjct 498993 GT 498992 >seq6 Length=2071177 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||||||||| || || |||||||| ||||| Sbjct 2048163 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCG 2048222 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | || || |||||||||||||| |||||||| |||||| Sbjct 2048223 GACACTATTGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGGATTCCTCCCGACCAG 2048282 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||| | || ||||| | ||||| || Sbjct 2048283 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGACGGACCCTCTCGGACTACAAC 2048342 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || ||| | ||||| || ||||| Sbjct 2048343 ATCCAGAAGGAGTCGACCCTCCACCTCGTCCTCCGTCTCCGTGGTGG 2048389 Score = 163 bits (180), Expect = 3e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || || ||||| || ||||| ||||||||||| Sbjct 2048391 ATGCAGATCTTCGTGAAGACCCTCACGGGGAAGACGATCACTCTGGAGGTTGAGTCGTCC 2048450 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||| || || |||||||||||||| || || || |||||| Sbjct 2048451 GACACGATCGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAG 2048510 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || |||||||| ||||| |||||||| | || || || ||||||| || Sbjct 2048511 CAGCGCCTGATCTTTGCTGGAAAGCAGCTCGAGGACGGACGCACGCTCTCAGACTACAAC 2048570 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| || ||||| ||||| ||| | ||||| || || || || Sbjct 2048571 ATCCAGAAGGAGTCGACTCTGCATCTCGTCCTCCGTCTCCGTGGAGGTCA 2048620 Score = 134 bits (148), Expect = 2e-26 Identities = 127/162 (78%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 27420 CAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAA 27479 |||||| || ||||||||||| || || || ||||| |||||| ||| | ||| | || Sbjct 2047900 CAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCATCTGACACCATCGACAA 2047959 Query 27480 TTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTT 27539 | | ||| | || ||||||||||||||||||||||| || ||||||||||| || || || Sbjct 2047960 TGTTAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGACCAGCAGCGCCTCATCTT 2048019 Query 27540 TGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581 || || ||||| || ||||||| ||| || || | ||||| Sbjct 2048020 CGCCGGCAAGCAGCTTGAGGATGGTCGCACGCTCTCTGACTA 2048061 >seq4 Length=2739924 Score = 141 bits (156), Expect = 1e-28 Identities = 299/443 (67%), Gaps = 6/443 (1%) Strand=Plus/Minus Query 31963 CGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCC 32022 || |||||||| || ||||| || |||||||| ||||||||||| | | | | Sbjct 2540750 CGTTCCATTCCCTCTGTCGCGGATGGTCTCAAGCCAGGTCAGCGCAAGGTCGTCTTCTCT 2540691 Query 32023 TGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCT-GTCGGGCTACGTGGC 32081 || |||||||||| | || | || |||||| ||| | ||||| || || | Sbjct 2540690 TGTTTCAAGAAGAAGATCAAGAACCAGATCAAGGTGCAACAGGTCGTCGGTCT---TGTC 2540634 Query 32082 AGAGCAAACG--GCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTT 32139 | | |||| || || |||||||| || ||||| ||| | ||| || ||| ||| Sbjct 2540633 ATGGACAACGCGGCGTACCACCACGGTGAAGCGTCACTCTACTCCACGATCGTCTCTCTT 2540574 Query 32140 GCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGG 32199 ||||||| ||| |||||| || ||| ||||||| ||| ||| || ||||| || Sbjct 2540573 GCTCAGAGCTTCGTCGGTAGCAACAACGTGAACTTGCTCTCGCCCAACGGTCAGTTCGGT 2540514 Query 32200 ACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGCA 32259 || || || ||||| ||||||||||| || | |||||||| ||||| | | | Sbjct 2540513 ACTCGTCTGCAGGGTGGTAAGGATGCTGCCAGTGCTCGTTACATTTTCACGAGCATTCCC 2540454 Query 32260 CCTTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGAT 32319 | ||||||| || ||| |||| | || || ||| | ||||| || || || Sbjct 2540453 CGGATCACGCGCACCATCTTCCACCCCGCTGATGACGCGATCCTCAACAACCTGTTCGAA 2540394 Query 32320 GACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAAC 32379 ||||| |||| ||||||| | || ||||| || || |||| ||| || | | || Sbjct 2540393 GACGGACAGCAAATCGAGCCTGAGTACTACATGCCTGTTGTTCCCATGGTCCTTATCAAT 2540334 Query 32380 GGTGCAGAAGGCATCGGAACGGG 32402 || || || || ||||| || || Sbjct 2540333 GGAGCCGACGGTATCGGTACTGG 2540311 Score = 132 bits (146), Expect = 5e-26 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 || ||||| ||||| || ||||| ||||| ||||| || | ||| | || | ||| Sbjct 1418540 CTCACCGGTAAGACCATCACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAG 1418481 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 | || || |||||||||||||| || || || |||||||||||||| || || || || Sbjct 1418480 TCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGC 1418421 Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606 ||||| |||||||| | || ||||| | ||||| || |||| ||||| || || || Sbjct 1418420 AAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTC 1418361 Query 27607 CATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || ||| | ||||| || ||||| Sbjct 1418360 CACCTTGTCCTCCGTCTCCGTGGTGG 1418335 >seq3 Length=2964310 Score = 132 bits (146), Expect = 5e-26 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 || || |||||||| || || |||||||| ||||| || | || | || | ||| Sbjct 1685635 CTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGATCGACAACGTCAAG 1685694 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 | || || |||||||||||||| || ||||| |||||||||||||| || || || || Sbjct 1685695 TCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTCATCTTCGCCGGC 1685754 Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606 ||||| |||||||| | || ||||| | ||||| || |||| ||||| || || || Sbjct 1685755 AAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTC 1685814 Query 27607 CATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || ||| | ||||| || ||||| Sbjct 1685815 CACCTCGTCCTCCGTCTGCGTGGTGG 1685840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310271680160