Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq6 122 8e-23 seq3 111 1e-19 seq4 98.7 9e-16 >seq6 Length=2071177 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||||||| | || || ||||| || || | || Sbjct 2048163 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCG 2048222 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || || ||||| || || || || ||||| || Sbjct 2048223 GACACTATTGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGGATTCCTCCCGACCAG 2048282 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || | || ||| | |||| | || || |||||| Sbjct 2048283 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGACGGACCCTCTCGGACTACAAC 2048342 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||||||| | || | || | ||| | || ||||| || Sbjct 2048343 ATCCAGAAGGAGTCGACCCTCCACCTCGTCCTCCGTCTCCGTGGTGGTAT 2048392 Score = 87.8 bits (96), Expect = 2e-12 Identities = 169/247 (68%), Gaps = 3/247 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || || ||| | || ||||| || || || ||||| Sbjct 2048391 ATGCAGATCTTCGTGAAGACCCTCACGGGGAAGACGATCACTCTGGAGGTTGAGTCGTCC 2048450 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || || || ||||| || ||||| || ||||| || Sbjct 2048451 GACACGATCGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAG 2048510 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || || || || | || ||| | || | || || |||||| Sbjct 2048511 CAGCGCCTGATCTTTGCTGGAAAGCAGCTCGAGGACGGACGCACGCTCTCAGACTACAAC 2048570 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAAC-AAACAC 27226 || || ||||||||||| | ||| | || | ||| | || || || | || | |||| Sbjct 2048571 ATCCAGAAGGAGTCGACTCTGCATCTCGTCCTCCGTCTCCGTGGAGG--TCACTAGACAC 2048628 Query 27227 TTTTGTA 27233 |||||| Sbjct 2048629 CTTTGTA 2048635 >seq3 Length=2964310 Score = 111 bits (122), Expect = 1e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27009 CTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAA 27068 ||||| |||||| | || || ||||| || || | || ||| |||| || | ||||| Sbjct 1685635 CTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGATCGACAACGTCAAG 1685694 Query 27069 CAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGC 27128 || || || ||||| || ||||| || ||||| || |||||| | || | ||||||| Sbjct 1685695 TCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTCATCTTCGCCGGC 1685754 Query 27129 AAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTA 27188 || || | || ||| | ||| |||| || |||||||| || |||||||||||| | Sbjct 1685755 AAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTC 1685814 Query 27189 CATTTGGTTTTGCGTTTGCGGGGTGG 27214 || | || | ||| |||| ||||| Sbjct 1685815 CACCTCGTCCTCCGTCTGCGTGGTGG 1685840 >seq4 Length=2739924 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27009 CTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAA 27068 || ||||| ||| | || ||||| || || || | || ||| | || || | ||||| Sbjct 1418540 CTCACCGGTAAGACCATCACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAG 1418481 Query 27069 CAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGC 27128 || || || ||||| || ||||| || ||||| || |||||| | || | ||||||| Sbjct 1418480 TCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGC 1418421 Query 27129 AAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTA 27188 || || | || ||| | ||| | ||||| |||||||| || |||||||||||| | Sbjct 1418420 AAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTC 1418361 Query 27189 CATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || | || | ||| | || ||||| || Sbjct 1418360 CACCTTGTCCTCCGTCTCCGTGGTGGTAT 1418332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918302143360