Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq6 176 1e-38 seq4 159 8e-34 seq3 156 1e-32 >seq6 Length=2071177 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| || |||||||| || |||| ||||||| ||| || Sbjct 2048374 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTCCGTCCGTCC 2048315 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| ||||| || ||||| ||||||| || ||||||||| Sbjct 2048314 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATCCCCTCCTTGTCC 2048255 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || || ||||| || || ||||| || ||||| ||| Sbjct 2048254 TGGATCTTCGACTTGACGTTGTCAATAGTGTCCGAAGACTCGACCTCAAGGGTGATGGTC 2048195 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || |||||||| || || | |||||| Sbjct 2048194 TTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 2048163 Score = 167 bits (184), Expect = 5e-36 Identities = 172/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | ||||| || || ||||| ||||| || |||||||| || || | || Sbjct 2048615 TCCACGGAGACGGAGGACGAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCTGAGAG 2048556 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | ||| || || |||||||| || || ||||| ||||| || ||||| || || | Sbjct 2048555 CGTGCGTCCGTCCTCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGAT 2048496 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 || ||||||||||||||||| ||||| || ||||| ||||| || |||||||| Sbjct 2048495 GCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATCGTGTCGGACGACTCAACCTC 2048436 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||||||||| |||||||| ||||| || || | |||||| Sbjct 2048435 CAGAGTGATCGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCAT 2048391 Score = 132 bits (146), Expect = 1e-25 Identities = 115/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| || ||||||||||| |||||||| ||||| || ||||| || |||| ||| ||| Sbjct 2048043 CCATCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCC 2047984 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||||||| ||||| || || || |||||||||||||| || |||||||| ||| Sbjct 2047983 TTGTCCTGAATCTTCGACTTAACATTGTCGATGGTGTCAGATGACTCGACCTCGAGGGTG 2047924 Query 211077 ATCGTCTTTCCCGTGAGAGTCTT 211099 || ||||| || ||||| ||||| Sbjct 2047923 ATGGTCTTGCCGGTGAGGGTCTT 2047901 >seq4 Length=2739924 Score = 159 bits (176), Expect = 8e-34 Identities = 150/191 (79%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || || ||||| || |||||||| || || | ||||| | || || Sbjct 1418350 AGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 1418409 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || || ||||| || || | || ||||||||| Sbjct 1418410 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 1418469 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||| ||| || |||||||||||||| ||| Sbjct 1418470 TGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTGATGGTC 1418529 Query 211083 TTTCCCGTGAG 211093 || || ||||| Sbjct 1418530 TTACCGGTGAG 1418540 >seq3 Length=2964310 Score = 156 bits (172), Expect = 1e-32 Identities = 149/191 (78%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| || |||||||| || |||| |||||| | || || Sbjct 1685825 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 1685766 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || || ||||| ||||| | || ||||||||| Sbjct 1685765 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 1685706 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| ||| || ||||| || ||||| ||| Sbjct 1685705 TGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTC 1685646 Query 211083 TTTCCCGTGAG 211093 || ||||| || Sbjct 1685645 TTGCCCGTCAG 1685635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151732670570