Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq6 118 2e-21 seq4 91.5 3e-13 >seq6 Length=2071177 Score = 118 bits (130), Expect = 2e-21 Identities = 160/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| ||||| ||||| ||||| || ||||||||||| || | | || | Sbjct 2048609 GAGACGGAGGACGAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTGCG 2048550 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || || || || ||||| || || ||||| || | ||||||||| | || ||| || Sbjct 2048549 TCCGTCCTCGAGCTGCTTT--CCAGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCC 2048492 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || || || || || ||| | || | |||| || ||| || || ||| Sbjct 2048491 TCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATCGTGTCGGACGACTCAACCTCCAGA 2048432 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || |||||||| ||||||||||||| |||||| Sbjct 2048431 GTGATCGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCAT 2048391 Score = 107 bits (118), Expect = 4e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || || || ||||| || ||||||||||| || | | || | Sbjct 2048381 GAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTCCG 2048322 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || ||||||||||| || | ||||||||| | | || || || Sbjct 2048321 TCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATCCCCTC 2048262 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| | || | |||| ||| ||| || ||||| || Sbjct 2048261 CTTGTCCTGGATCTTCGACTTGACGTTGTCAATAGTGTCCGAAGACTCGACCTCAAGGGT 2048202 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || |||||||| ||||||| |||||| Sbjct 2048201 GATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 2048163 >seq4 Length=2739924 Score = 91.5 bits (100), Expect = 3e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||||||||| || || || ||||| || ||||||||||| |||| | || | Sbjct 1418343 GAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCG 1418402 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || ||||||||||| || | ||||||||| | | ||| || || Sbjct 1418403 GCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTC 1418462 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| | || | | |||| || ||| || || ||||| Sbjct 1418463 CTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGT 1418522 Query 152066 AATAGTTTTGCCCGTGAG 152083 || || || || ||||| Sbjct 1418523 GATGGTCTTACCGGTGAG 1418540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820533900078