Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq6 159 7e-34 seq3 150 4e-31 seq4 147 5e-30 seq7 89.7 1e-12 seq2 84.2 5e-11 >seq6 Length=2071177 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | || || || |||||||||||||| | Sbjct 2048390 ACCACCACGGAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 2048331 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || || ||||| || || || ||||| ||||| | || || ||||| || Sbjct 2048330 GAGGGTCCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGG 2048271 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| | || ||| | || ||||||||||||| ||||| Sbjct 2048270 AATCCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATAGTGTCCGAAGACTCGAC 2048211 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || |||| |||||| ||||| |||||||| Sbjct 2048210 CTCAAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 2048163 Score = 158 bits (174), Expect = 3e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || || ||||| | || || || |||||||||||||| | Sbjct 2048618 ACCTCCACGGAGACGGAGGACGAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCTGA 2048559 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||||| || ||||| || || || || |||||||||| || || ||||| ||| Sbjct 2048558 GAGCGTGCGTCCGTCCTCGAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCGGGCGG 2048499 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050 || ||||||||||| |||||||| ||| || || | ||||| ||||| || | || | Sbjct 2048498 GATGCCCTCCTTGTCCTGGATCTT-GCTCTTCACATTGTCGATCGTGTCGGACGACTCAA 2048440 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || |||||||||||||| ||||| | ||||| ||||| |||||||| Sbjct 2048439 CCTCCAGAGTGATCGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCAT 2048391 Score = 114 bits (126), Expect = 3e-20 Identities = 123/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 ||||||||| |||||||| |||||||| || || || ||||| ||||| | || || | Sbjct 2048063 TGTAGTCAGAGAGCGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCT 2048004 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 |||| ||||| ||||||||||| || ||||| | || || | ||||| ||||| | Sbjct 2048003 GGTCGGGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTTAACATTGTCGATGGTGTCAG 2047944 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTT 283084 | | ||||| ||||| ||||| ||||| || || | ||||| Sbjct 2047943 ATGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTT 2047901 >seq3 Length=2964310 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || || || | || || || |||||||||||||| | Sbjct 1685841 ACCACCACGCAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 1685782 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| || || || ||||| ||||| | ||| || ||||| || Sbjct 1685781 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGAGG 1685722 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || ||| | ||||| |||||||| | ||||| Sbjct 1685721 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 1685662 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCA 283077 || || ||||| ||||| ||||||| Sbjct 1685661 CTCAAGGGTGATGGTCTTGCCCGTCA 1685636 >seq4 Length=2739924 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | || || || |||||||||||||| | Sbjct 1418334 ACCACCACGGAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 1418393 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || ||||| ||||| | ||| || ||||| || Sbjct 1418394 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGG 1418453 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || ||| | ||||| |||||||| | ||||| Sbjct 1418454 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGAC 1418513 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 ||||||||||| |||||||| || Sbjct 1418514 CTCGAGAGTGATGGTCTTACCGGT 1418537 Score = 86.0 bits (94), Expect = 1e-11 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 273778 TCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACT 273837 ||||||||||||| | ||||| ||| ||||| ||||| ||||| | | ||| |||| Sbjct 2540462 TCGTGAAAATGTAACGAGCACTGGCAGCATCCTTACCACCCTGCAGACGAGTACCGAACT 2540521 Query 273838 GACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCA 273897 |||| | |||| ||| |||| | |||||||||||||||| | |||||| | | | Sbjct 2540522 GACCGTTGGGCGAGAGCAAGTTCACGTTGTTGCTACCGACGAAGCTCTGAGCAAGAGAGA 2540581 Query 273898 CGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGC 273937 |||| || | || || | || |||||||| || || Sbjct 2540582 CGATCGTGGAGTAGAGTGACGCTTCACCGTGGTGGTACGC 2540621 >seq7 Length=1807069 Score = 89.7 bits (98), Expect = 1e-12 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || ||||||||||| || | |||||| | || || ||||| || || || || || | Sbjct 104114 CTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCCGACCGCCTG 104173 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||| || || || |||| || || | ||||| |||||||||| ||| |||||| Sbjct 104174 CTCGTCGCCCTCGGTAACGACAAGGTCTGGAACTCGGCCAACCCCTTCGATTTCATGGAG 104233 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGT 230386 | || || || ||||| || | ||||||||||| |||||| Sbjct 104234 ATGATCTCGCTGCAGGGCAAGGCCAACTTCTTCGAGTCGCGTGT 104277 >seq2 Length=2999908 Score = 84.2 bits (92), Expect = 5e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 230247 ATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAA 230306 ||| | |||||||| |||||||| || || || | |||| ||||| || ||||| ||| Sbjct 2063547 ATGTGTCAATATATGGAATTCGTGGCCGACCGCCTCGTCGTCGCGCTTGGATACGACAAA 2063606 Query 230307 GTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACT 230366 | || || | | |||||| || | | ||||||||||| || ||||| || ||| | Sbjct 2063607 ATCTACCACGCGAGGAACCCGTTTGACTGGATGGAGCTCATCTCTCTCCAAGGCAAAGCC 2063666 Query 230367 AACTTCTTCGA 230377 || |||||||| Sbjct 2063667 AATTTCTTCGA 2063677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738958595772