Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2 118 2e-21 seq16 111 3e-19 >seq2 Length=3385878 Score = 118 bits (130), Expect = 2e-21 Identities = 299/444 (67%), Gaps = 8/444 (2%) Strand=Plus/Plus Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGT 230229 ||||| | |||||| ||| |||| | | ||||| ||||| | || || || Sbjct 2876729 TCGTTCGGCGAGCGCCTCATCGCGTTCGCTGCCGTTGAGGGTATCTTCTTCTCAGGCTCG 2876788 Query 230230 TTCTGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAA 230288 ||| ||| ||||||| |||||| ||| || | ||||| |||||| | || || Sbjct 2876789 TTC-GCGTCCATCTTCTGGCTGAAGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCCAA 2876847 Query 230289 CGAGTTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAA 230347 |||| ||||| ||||||||||||||||| || | | |||| | || | | | Sbjct 2876848 CGAGCTCATCTCGCGCGACGAGGGTCTCCA-CACCGACTTCGCCTGCCTGCTCTTCACCC 2876906 Query 230348 AGCTCCAGAACAAGCTACCATTCG-AGACGGTCAAACAAATCATTACAGAAGCAGTTGAA 230406 | |||| | | ||| || | ||| |||| | ||||| | || || || | Sbjct 2876907 ACCTCCGCCGCCGTCC-CCACCCGGACACGATCAACAAGATCATCAAGGAGGCCGTCAAG 2876965 Query 230407 AACGAAAAGGAGTTCATTTGTGACGCTATTCCA-TGTCGCCTTATTGGCATGAACGCTGA 230465 | || |||||||| | || || | || |||||| | || ||||||||||| | Sbjct 2876966 ATTGAGCAGGAGTTCCTCACCGAGGCCCTCCCGGTGTCGC-TCATCGGCATGAACGCCAA 2877024 Query 230466 ACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGA 230525 || ||| | ||||||||||| ||||| |||||||| | | || || ||||| |||| Sbjct 2877025 GCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGTCTCCTCGTCGCCCTTGGCAACGA 2877084 Query 230526 GAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAA 230585 || | | ||||| |||||||| | || |||||| | || ||||| ||||| || Sbjct 2877085 CAAGATCTGGAACTCGGCCAACCCCTTCGACTTCATGGAGATGATCTCGCTGCAAGGCAA 2877144 Query 230586 GACCAACTTCTTCGAAAAGCGTGT 230609 | ||||||||||||| |||||| Sbjct 2877145 GGCCAACTTCTTCGAGTCGCGTGT 2877168 >seq16 Length=836766 Score = 111 bits (122), Expect = 3e-19 Identities = 293/442 (66%), Gaps = 4/442 (1%) Strand=Plus/Plus Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGT 230229 ||||| | |||||| ||| |||||| | || || ||||| | || || || Sbjct 122424 TCGTTCGGCGAGCGCCTCATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCG 122483 Query 230230 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 230289 ||| | ||||||| |||||| ||| ||| | ||||| |||||| | || ||| Sbjct 122484 TTCGCCTCCATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGCCTCACGTTCTCGAAC 122543 Query 230290 GAGTTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAA 230348 ||| ||||| |||||||||||||| || || | | |||| | || | | | | Sbjct 122544 GAGCTCATCTCGCGCGACGAGGGTCTGCA-CACCGACTTCGCCTGCCTGCTCTTCACGCA 122602 Query 230349 GCTCCAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAA 230408 |||| | || | || ||| |||| | ||||| | || || || | | Sbjct 122603 CCTCCGCCGCCGGCCGCACCCGGACACGATCAACAAGATCATCAAGGAGGCGGTCAAGAT 122662 Query 230409 CGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAAC 230467 ||| |||||||| | || || | || ||| | || || ||||||||||| | | Sbjct 122663 CGAGCAGGAGTTCCTGACCGAGGCCCTCCCC-GTCTCGCTCATCGGCATGAACGCCAAGC 122721 Query 230468 TTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGA 230527 | ||| | |||||||| || ||||| ||||||||| | | || || || || |||| | Sbjct 122722 TCATGTGCCAGTACATTGAGTTCGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGACA 122781 Query 230528 AAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGA 230587 | | | ||||| |||||||| | || |||||| | || ||||| || || ||| Sbjct 122782 AGCTCTGGAACTCGTCCAACCCCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGG 122841 Query 230588 CCAACTTCTTCGAAAAGCGTGT 230609 ||||||||||||| |||||| Sbjct 122842 CCAACTTCTTCGAGTCGCGTGT 122863 Score = 86.0 bits (94), Expect = 1e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 230470 ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAA 230529 ||| | |||||||| ||||| || || || ||| | | || || ||||| ||||| || Sbjct 439769 ATGTGCCAGTACATGGAATTTGTGGCTGATCGCCTGGTCGTCGCGCTTGGCTACGACAAG 439710 Query 230530 GTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACC 230589 | || |||| | ||| || |||| | ||||||||||| || |||||||| || || Sbjct 439709 ATCTATCACTCGAGGAATCCGTTTGACTGGATGGAGCTCATCTCCCTTCAAGGCAAAGCC 439650 Query 230590 AACTTCTTCGAAAAGCGTGT 230609 ||||| |||||| ||||| Sbjct 439649 AACTTTTTCGAATCTCGTGT 439630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057822427809080