Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq16 143 3e-29 seq2 134 1e-26 >seq16 Length=836766 Score = 143 bits (158), Expect = 3e-29 Identities = 306/452 (68%), Gaps = 4/452 (1%) Strand=Plus/Minus Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019 ||| || ||||| ||| || | |||||||| | ||| || ||||| || || || Sbjct 122591 CAGGCAGGCGAAGTCGGTGTGCAGACCCTCGTCGCGCGAGATGAGCTCGTTCGAGAACGT 122532 Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079 | |||||||| || || ||||| | ||| || || | ||||||||| ||||| || Sbjct 122531 GAGGCCGGGCATGAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAACGAGCCAGAGAA 122472 Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTT 17139 ||| ||||||||||||| || || ||||| | || ||| || ||| || ||| | Sbjct 122471 GAAGATACCCTCGACGGCGGCGAAGGCGATGAGGCGCTCGCCGAACGACGACCGCTTG-T 122413 Query 17140 ACGA-ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGG 17198 ||| ||||| || |||| ||||| || | ||| |||||| ||||| || || | Sbjct 122412 CCGAGATCCAGCGAAGCGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTGTCGATAG 122353 Query 17199 CCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGT 17258 ||| || | | || | |||| || ||||| ||||| || || || Sbjct 122352 CCTGGAACAGGTACTGACGGCGCGCGTTGTCGCGGATGTACGTGTCGATCAGGAGCGAGT 122293 Query 17259 ACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATC-GGGCTTCC 17317 || | || ||||| ||||||||||| ||||| |||||||| || | || ||| || Sbjct 122292 ACGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAA-CGTCTTGGCCTCA 122234 Query 17318 GCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTC 17377 | || || || || || |||| || || | || || ||||| || |||||||| | Sbjct 122233 GAGATCTGGACCTCTCCGCAGAAGCGCTCGACGAGGTTCTCGTTGACTATGCCGTCCGAC 122174 Query 17378 GCGGCGAAAAACGCCAATATATGCTTAATGAA 17409 |||||||| || || | | |||| ||||| Sbjct 122173 GCGGCGAAGAAAGCAAGGACGTGCTCGATGAA 122142 >seq2 Length=3385878 Score = 134 bits (148), Expect = 1e-26 Identities = 302/451 (67%), Gaps = 2/451 (0%) Strand=Plus/Minus Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019 ||| || ||||| ||| || | |||||||| | ||| || ||||| || || || Sbjct 2876896 CAGGCAGGCGAAGTCGGTGTGGAGACCCTCGTCGCGCGAGATGAGCTCGTTGGAGAACGT 2876837 Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079 | |||||||| || || ||||| | ||| || || | |||||||| || || || Sbjct 2876836 GAGGCCGGGCATGAGGCCGCGCTTCTTCAGCCAGAAGATGGACGCGAACGAGCCTGAGAA 2876777 Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTT 17139 ||| |||||||| |||| || |||||||| | || ||| || ||| | | || || Sbjct 2876776 GAAGATACCCTCAACGGCAGCGAACGCGATGAGGCGCTCGCCGAACGAGGAGCGTTGGTC 2876717 Query 17140 ACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGC 17199 |||||| | | |||| ||||| || | ||| ||||| || || || ||||| Sbjct 2876716 GGAAATCCACCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGC 2876657 Query 17200 CTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTA 17259 || || | || | |||| || ||||| |||||||| || ||| Sbjct 2876656 CTGGAACAGGAACTGGCGGCGCGCGTTGTCGCGGATGTACGTGTCGATGAGGAGCGAGTA 2876597 Query 17260 CATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATC-GGGCTTCCG 17318 | | || || || ||||||||||| ||||| || ||||| || | || ||| || | Sbjct 2876596 CGTCTCCGAATGGATGTTCTCCATCATGATCTGGAAACCGTAGAA-CGTCTTGGCCTCGG 2876538 Query 17319 CTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCG 17378 || || || || || |||| || ||| | || |||||||| |||||||| || || Sbjct 2876537 AGATCTGGACCTCGCCGCAGAAGCGCTCCACGAGGTTTTCGTTGACGATGCCATCCGACG 2876478 Query 17379 CGGCGAAAAACGCCAATATATGCTTAATGAA 17409 ||||||| ||||| | | |||| ||||| Sbjct 2876477 CGGCGAAGAACGCGAGGACGTGCTCGATGAA 2876447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544849558880