Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2 113 5e-20 seq16 93.3 5e-14 >seq2 Length=3385878 Score = 113 bits (124), Expect = 5e-20 Identities = 144/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 145963 GGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAA 146022 |||||| |||||||| | |||| ||| |||||||| ||||||| ||| ||| Sbjct 3289714 GGGTTCTCCTTGATCTTGCGGATCACCTCCGCCAGCTGGTCGACGCCCTTGCCCGTGTAG 3289773 Query 146023 TCTGTCTTGGA-GTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGG 146081 || || | | || | ||||| |||| |||||||||| ||||||||||||||| ||||| Sbjct 3289774 TCGTCCTCGCATGTGC-CGTACTCGGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGG 3289832 Query 146082 CCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCC 146141 || ||||| || | |||||| || || ||| | || ||||||| ||| | | | Sbjct 3289833 GCCGAGGTCGCCCTCCCGCCTGTGGCCGAGGCCGACGCGCTCGAGGAACTCCTTGCTCGC 3289892 Query 146142 GTTGGCGTCCCAGATC 146157 ||| ||||||||||| Sbjct 3289893 GTTTCCGTCCCAGATC 3289908 >seq16 Length=836766 Score = 93.3 bits (102), Expect = 5e-14 Identities = 335/529 (63%), Gaps = 60/529 (11%) Strand=Plus/Plus Query 145687 GGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGC 145746 |||||||| |||| ||| ||||| ||||| |||| ||||||| |||| ||| Sbjct 553929 GGCTCCACATGGTCCTTGTAAACGTGAGCGTCACCCATCTGCAGGATGAATTCCCTCGGC 553988 Query 145747 TCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAG 145806 || ||||||| | |||| ||||| || ||||| | |||| || |||||||| Sbjct 553989 TCACACCCCGTGACGAACGCGATCATGTGCGTGAGCAGAGCGTAGGACGCAATGTTGAAC 554048 Query 145807 GGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAG---------- 145856 ||||| || || || | ||| | ||||| |||| |||| || || Sbjct 554049 GGCACGCCGAGTCCAACGTCACAGCTACGCTGATACATGAGGCACGACAGTCCCGGCTTC 554108 Query 145857 -CTCCC-----CGCCCGCC-----ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGG 145905 ||||| | || || ||| |||||||||| | | ||| || |||||||| Sbjct 554109 TCTCCCTCGTTCTCCGGCAGGTGGACGAAGAACTGGCAGAACATGTGACAAGGCGGCAGC 554168 Query 145906 GCCATG-GCGGG-----------CAGGT------CCGC-------------------CGG 145928 |||||| ||||| ||| | |||| ||| Sbjct 554169 GCCATGAGCGGGAGGTCTGATGTCAGCTTGCGAGCCGCAGTCATTCAGCTCACCTTTCGG 554228 Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAG 145988 |||||| ||| | | || || | | | | ||||||| |||||||| | |||| Sbjct 554229 GTTCCAAGCGCTCATGATGATACGTCGGTCCGTGGGGTTCTCCTTGATCTTGCGAATCAC 554288 Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGC 146048 ||| |||||| |||||||||| ||| ||| || || | || ||||| | || Sbjct 554289 TTCCGCGAGCTGATCCACGCCCTTGCCCGTGTAGTCGTCCTCGCAGGTGCCGTACTCCGC 554348 Query 146049 CCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTC-CCCGGGCTCCCTGTGCC 146107 |||||||||| |||||||||||| || || || || ||||| ||| || || ||| | Sbjct 554349 GCCGAAGTGCCGCCACTGGAACCCATACACCGGTCCGAGGTCGCCCTCGC-GCCGGTGTC 554407 Query 146108 CCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGAT 146156 | || || | || ||||||| ||| | |||| |||||||||| Sbjct 554408 CGAGACCAACACGCTCGAGGAACTCCTTGCTTGCGTTTCCGTCCCAGAT 554456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075944388640