Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq10 122 1e-22 seq13 113 5e-20 seq1 91.5 2e-13 seq4 84.2 3e-11 seq6 82.4 9e-11 >seq10 Length=2164251 Score = 122 bits (134), Expect = 1e-22 Identities = 145/194 (75%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || |||| || ||||||||||||||||| Sbjct 2138939 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAA 2138880 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| | || | | ||| Sbjct 2138879 AATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC-TGAATCTTCGACTTCACGT 2138821 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||||| ||| || || |||| ||||| || || ||||| || ||||| | Sbjct 2138820 TGTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATCGTCTTACCCGTGAGGGTCTTCA 2138761 Query 43171 CAAAGATTTGCATT 43184 | ||||| |||||| Sbjct 2138760 CGAAGATCTGCATT 2138747 Score = 113 bits (124), Expect = 5e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || | || || |||||||| |||||||| Sbjct 2138711 CTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGTCCATCCTCGAGCTGCTTTCCAGCGAA 2138652 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||||| || | | |||||||||| ||| || |||| | Sbjct 2138651 GATCAGGCGCTGCTGGTCGGGGGGGATCCCCTCCTTGTCCTGGATCTTCAACTTGACATT 2138592 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||||| ||| || || |||| |||||||| ||||| || || ||||| || Sbjct 2138591 GTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCAGTCAGAGTCTTGAC 2138532 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 2138531 GAAGATCTGCAT 2138520 Score = 89.7 bits (98), Expect = 6e-13 Identities = 122/165 (74%), Gaps = 4/165 (2%) Strand=Plus/Minus Query 43006 TGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCT 43065 |||| |||| || || || | || || |||||||| ||||| || ||||| ||||||| Sbjct 2138414 TGTAGTCAGAAAGGGTACGACCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCT 2138355 Query 43066 GGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTC 43123 |||||| || | | |||||||||| ||| | || | |||| ||| | | | ||||| Sbjct 2138354 GGTCGGGGGGGATCCCCTCCTTGTCC-TGAATCTTCGACTTGA-CGTTGTCAATGGTGTC 2138297 Query 43124 GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 ||| || || |||| |||||||| ||||| || |||||||| Sbjct 2138296 AGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGCGTCTT 2138252 >seq13 Length=1285846 Score = 113 bits (124), Expect = 5e-20 Identities = 145/195 (74%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| |||| ||||| || | || || |||||||| || ||||| Sbjct 1261201 CTCCTTCTGGATGTTGTAGTCAGAGAGAGTACGACCATCCTCGAGCTGCTTTCCGGCGAA 1261142 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 43110 || || ||||||||||| | || | | |||||||||| ||| | || | |||| || Sbjct 1261141 AATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC-TGAATCTTGCTCTTGA-CG 1261084 Query 43111 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | | | |||||| || || || || | |||||| || |||||||| | |||||| Sbjct 1261083 TTGTCAATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTTGCCCGTCAACGTCTTG 1261024 Query 43170 ACAAAGATTTGCATT 43184 |||||||| |||||| Sbjct 1261023 ACAAAGATCTGCATT 1261009 Score = 107 bits (118), Expect = 2e-18 Identities = 132/178 (74%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | ||| || || |||| || |||||||| |||||||| Sbjct 1260973 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 1260914 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || ||||||||| ||| || |||| ||| Sbjct 1260913 GATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTCGACTTGA-CGT 1260855 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | |||||| ||| || || || | |||||||| ||||| || || ||||| Sbjct 1260854 TGTCGATGGTGTCGGACGACTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTT 1260797 Score = 82.4 bits (90), Expect = 9e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 |||| ||| |||||| || || |||||||||| || || || | || || |||||| Sbjct 1261440 TGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGAGAGGGTACGTCCATCCTCCAGCTGC 1261381 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 || || ||||| || || ||||||||||| | || | | |||||||||| ||| || Sbjct 1261380 TTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTC 1261321 Query 43101 TGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 |||| ||| | | | || || || || || || | || || || || || || Sbjct 1261320 GACTTGA-CGTTGTCGATGGTATCCGAGGACTCAACCTCCAGAGTAATCGTCTTTCCAGT 1261262 Query 43160 TAGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || ||||| ||||| Sbjct 1261261 AAGAGTCTTGACGAAGATCTGCAT 1261238 >seq1 Length=3718887 Score = 91.5 bits (100), Expect = 2e-13 Identities = 125/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || |||| || |||||||| || ||||| Sbjct 1834099 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1834040 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || |||||||||| ||| || |||| ||| Sbjct 1834039 GATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 1833981 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 43162 | | | ||||| || || || || | |||||||| |||||||| || Sbjct 1833980 TGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAG 1833929 >seq4 Length=3236612 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/158 (73%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 43006 TGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCT 43065 |||| |||| ||||| || | || || |||||||| || ||||| || || ||||||| Sbjct 326235 TGTAGTCAGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCT 326294 Query 43066 GGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCG 43124 |||||| ||| | || |||||||||| || | || | | | ||| | | | |||||| Sbjct 326295 GGTCGGGCGGGATGCCCTCCTTGTCC-TGGATCTTGGACTTAACGTTGTCGATCGTGTCC 326353 Query 43125 CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 43162 || || || |||| || ||||| |||||||| || Sbjct 326354 GAGGACTCGACCTCGAGAGTAATGGTCTTGCCCGTAAG 326391 >seq6 Length=2834147 Score = 82.4 bits (90), Expect = 9e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | ||||| || |||| || |||||||| || ||||| Sbjct 1117923 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1117864 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 ||||| ||||||||||||| || | | |||||||||| ||| || Sbjct 1117863 GATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTT 1117816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816770864480