Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2 255 1e-62 seq8 192 1e-43 seq11 145 2e-29 seq5 111 3e-19 >seq2 Length=3385878 Score = 255 bits (282), Expect = 1e-62 Identities = 615/920 (67%), Gaps = 18/920 (2%) Strand=Plus/Plus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||| | |||||| || || ||| || || |||||| || || |||||| Sbjct 567758 TACAACTACTTCGGTTTCAAGACCCTCGAGCGCTCCTACCTCCTCCGCATCGACGGCAAG 567817 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 || | || || |||||| ||| ||||||| || | || || || ||| || || Sbjct 567818 ATTGCAGAGCGCCCTCAGCATATGCTGATGCGTGTTTCCGTTGGCATCCACGGCGACAAC 567877 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 || |||| || |||||||||||| | ||| || || | | || || ||| || Sbjct 567878 ATTGAGAAGGTCATCGAGACGTACAACCTTATGTCCGAGCGGTACTTCACGCACGCCTCA 567937 Query 248998 CCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCC 249057 ||||||||||||||| | || ||| || ||| || || ||||| || | ||| Sbjct 567938 CCGACGCTCTTCAACTCGGGCACCCCTCACGCCCAGATGTCGTCCTGCTTCCTCGTCGCC 567997 Query 249058 ATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAA-ACAGACGGCGAAGATTTC 249116 ||| | |||||||| | ||||| ||||| ||||| || || || | || ||||||| Sbjct 567998 ATGAAGGACGACTCCATTGACGGTATTTACGACACTCTCAAGACCTGC-GCACAGATTTC 568056 Query 249117 TAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACAT 249176 || || ||||| |||||||| || ||||||||| |||||||| |||||||| Sbjct 568057 AAAGACTGCCGGCGGCATCGGTCTTCATATCCACAACATCCGTGCGAAGGGCTCGTACAT 568116 Query 249177 CAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCAC 249236 | ||||| || || | | | |||||||| ||| | ||||| || || | || Sbjct 568117 CGCTGGTACGAACGGTTACTCTAACGGTATCGTCCCCATGCTTCGTGCCTACGACGCTAC 568176 Query 249237 CGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGA 249293 ||| | | | | |||||| || | || || | |||||||| || | || Sbjct 568177 TGCCCGTTACGTTGACCAGGGTGGTAACAAGCGGCCCGGTGCCTTCGCCATCTACCTTGA 568236 Query 249294 AGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCT 249353 ||||||||||| || || || ||||| ||| | |||||| |||| || || Sbjct 568237 GCCTTGGCACGCCGACATCTTTGACTTCCTCGACCTCCGTAAGAACCACGGGAAGGAAGA 568296 Query 249354 CATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGT 249413 | | ||||||||||| ||||||| ||| ||| |||||||| |||||||| || || Sbjct 568297 GGTCCGTGCGCGTGACCTTTTCTACGCCCTCTGGATCTCCGACCTGTTCATGAAGCGTGT 568356 Query 249414 CAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGA-CGCCCCGGACCTCATCGATC 249472 | || |||||||||| ||||| || | | || | || ||||||| |||| ||| Sbjct 568357 CGAGTCCGACGGCGACTGGACCCTCATGTGCCCTGCTGAGTGCCCCGG-CCTCTCTGATG 568415 Query 249473 TACACGGCGCCGACTTCGACCAAGCCTATAAGAAATACGAATCCAACGGCATCG---GCA 249529 ||||| | || ||||| || ||| ||| ||||| | ||||| | ||| Sbjct 568416 TACACTCTGAGGAGTTCGAGCAGCTGTATGAGAGCTACGAGCGCGCCGGCAAGGGTCGCA 568475 Query 249530 AGACAATCAAGGCTCGGACCCT---TTTTGCGAAGGTGGTGGAGTCCCAGATAGAGACAG 249586 |||| |||||||| | || || || || | | ||||| | |||| ||||| | Sbjct 568476 AGACCATCAAGGCCCAGAAGCTGTGGTTCGCCA---TCTTGGAGGCGCAGACTGAGACCG 568532 Query 249587 GGGGGCCGTATTAT-TTGTTCAAAGACGCGTGCAACGCCAAGAGTAACCAACGGCATCTT 249645 | || || | | || | | ||| ||||| ||| |||| ||||||| ||| || Sbjct 568533 GTGGCCCCT-TCATGCTCTACAAGGACGCCGCGAACCGCAAGTCGAACCAACAGCACCTC 568591 Query 249646 GGTACCATCCGCTCGTCAAATCTCTGTGCAGAGGTGATTCAATACTCGTCCAAGGAGGAG 249705 || || ||| || || || ||||| | ||| | || | ||||| || || ||| Sbjct 568592 GGCACTATCAAGTCATCCAACCTCTGCACTGAGATCATCGAGTACTCTTCGCCCGATGAG 568651 Query 249706 ATTGCCGTCTGCAACCTGGC 249725 | |||||||||||||| || Sbjct 568652 GTCGCCGTCTGCAACCTTGC 568671 >seq8 Length=2605587 Score = 192 bits (212), Expect = 1e-43 Identities = 596/910 (65%), Gaps = 28/910 (3%) Strand=Plus/Plus Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892 ||||| || || ||| || || || ||| || || || ||||||| || || Sbjct 1314086 TTCAAGACTCTCGAGCGCTCCTACCTGCTCCGTATCGACGGAAAGATCGCTGAGCGTCCC 1314145 Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTC 248952 ||||||||| | ||||| || | ||||| || ||| || |||| |||| || || Sbjct 1314146 CAGCACATGCTCATGCGTGTCTCCGTCGGTATCCACGGTGACAACATTGAGAAGGTAATC 1314205 Query 248953 GAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAAC 249012 ||||| |||| | ||| ||| |||| | || || ||| | ||||||||||||||| Sbjct 1314206 GAGACCTACAACCTCATGTCTGAGCGCTACTTCACGCACGCCTCGCCGACGCTCTTCAAC 1314265 Query 249013 GCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCT 249072 |||||||| || ||| || || ||||| || | |||||| | || ||||| Sbjct 1314266 TCCGGTACCCCTCACGCCCAGATGTCGTCTTGCTTCCTCGTCGCCATGAAGGATGACTCG 1314325 Query 249073 GTCGACGGCATTTATGACACGCTTAA-ACAGACGGCGAAGATTTCTAAATTCGCGGGCGG 249131 | ||||| || || ||||| || || || | ||| |||| || || || || || Sbjct 1314326 ATTGACGGTATCTACGACACCCTCAAGACCTGC-GCGCAGATCTCCAAGACTGCCGGTGG 1314384 Query 249132 AATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGG 249191 ||||||||| | || |||||| || |||||||| ||||||||| ||||| || || Sbjct 1314385 TATCGGTCTCCACATCCACAACATTCGCGCGAAGGGCTCGTACATCGCTGGTACCAACGG 1314444 Query 249192 GGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAA 249251 | | |||||||| ||| | || || || || | || || | | | | | Sbjct 1314445 TTACTCGAACGGTATCGTTCCCATGCTCCGTGCCTACGACGCTACTGCGCGTTACGTTGA 1314504 Query 249252 CCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGC 249305 ||||| || ||||| || | || ||||| || | || |||||||| Sbjct 1314505 CCAGGGAGGCAACAAGCGCC---CCGGCGCCTTTGCCATCTACCTTGAGCCCTGGCACGC 1314561 Query 249306 CGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCG 249365 ||| || || || ||||| ||| | |||||| |||| || ||| | | || || Sbjct 1314562 CGACATCTTCGACTTCCTTGACCTCCGTAAGAACCACGGAAAGGAGGAGGTCCGTGCTCG 1314621 Query 249366 TGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACGG 249425 |||||| ||||||| ||| ||| ||||||| | |||||| || ||| || | ||||| Sbjct 1314622 TGACCTGTTCTACGCCCTCTGGATCTCCGATCTCTTCATGAAGCGTGTCGAGTCTGACGG 1314681 Query 249426 CGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTCATCGATCTACACGGCGCCGA 249485 ||| ||||| || | | || | || ||| | ||| || | ||| || || Sbjct 1314682 CGACTGGACTCTCATGTGCCCCGCTGAGTGCCCTGGTCTCTCGGACGTTCACTCCGAGGA 1314741 Query 249486 CTTCGACCAAGC-CTATAAGAAATAC--GAATCCA---ACGGCATCGGCAAGACAATCAA 249539 ||||| |||| ||| | | ||| ||| || | || | | ||||| ||||| Sbjct 1314742 GTTCGA-GAAGCTCTACACCAGCTACGAGAAGGCAGGTAAGGGA--CGTAAGACGATCAA 1314798 Query 249540 GGCTCGGACCCT---TTTTGCGAAGGTGGTGGAGTCCCAGATAGAGACAGGGGGGCCGTA 249596 ||| | || || || || | | | ||| |||||| ||||| || || || | Sbjct 1314799 GGCCCAGAAGCTCTGGTTCGCCA---TCTTAGAGGCCCAGACTGAGACCGGCGGTCCCT- 1314854 Query 249597 TTAT-TTGTTCAAAGACGCGTGCAACGCCAAGAGTAACCAACGGCATCTTGGTACCATCC 249655 | || | | ||| |||||| |||| |||| ||||| | ||| || || |||||| Sbjct 1314855 TCATGCTCTACAAGGACGCGGCCAACCGCAAGTCGAACCAGCAGCACCTCGGCACCATCA 1314914 Query 249656 GCTCGTCAAATCTCTGTGCAGAGGTGATTCAATACTCGTCCAAGGAGGAGATTGCCGTCT 249715 || || || || || | ||| | || | ||||| || || ||| ||||||||| Sbjct 1314915 AGTCCTCCAACCTGTGCACTGAGATCATCGAGTACTCCTCTCCTGATGAGGTTGCCGTCT 1314974 Query 249716 GCAACCTGGC 249725 ||||||| || Sbjct 1314975 GCAACCTTGC 1314984 >seq11 Length=1492038 Score = 145 bits (160), Expect = 2e-29 Identities = 243/353 (69%), Gaps = 24/353 (7%) Strand=Plus/Minus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 ||||| || |||| ||| ||||||||||||| || ||||||||||| || ||||| || Sbjct 502254 CTTCCGCACATGCTCTTCTACGGTCCTCCCGGCACGGGCAAGACGTCCACGATCCTCGCA 502195 Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120 ||||| ||| || || || | | | | ||||||||||||||||||||| Sbjct 502194 CTGGCGCGACAGCTCTTCGGGCCCGACCTCTTCAAGTCGCGCGTGCTCGAGCTGAACGCG 502135 Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTC---CAAGATG 254177 || ||||| ||||| | ||||||| | || ||||||||||| ||| | | ||| | Sbjct 502134 TCGGACGAGCGCGGCATCTCCGTCGTCAGGGAGAAGATCAAGACCTTCGCGCGCGAGACG 502075 Query 254178 TCG-------ATTTCGTCGTTCCAACC--CGGC------------TGTCCGCCTTTCAAG 254216 || | || ||| | | | |||| || ||||| | |||| Sbjct 502074 CCGCGCCATAACCCCGGCGTCGCCAGCGACGGCATCTCGTATCCGTGCCCGCCGTACAAG 502015 Query 254217 CTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGA 254276 ||||| || || |||||||| ||| | |||||| ||||||||| |||||| || || Sbjct 502014 CTCGTTATTCTCGACGAGGCCGACTCGATGACGCAGGACGCGCAGAGCGCCCTACGGCGC 501955 Query 254277 ACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGT 254329 | ||||||||| |||| | ||||| || || || ||||||||||| || Sbjct 501954 ATCATGGAGACGTACTCGAGGATCACGCGGTTCTGTCTCGTGTGCAACTATGT 501902 >seq5 Length=2913187 Score = 111 bits (122), Expect = 3e-19 Identities = 232/346 (67%), Gaps = 30/346 (9%) Strand=Plus/Plus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| |||| || |||||||| ||||||||||| || ||| | || || || || Sbjct 1018452 TGCTCTTCTACGGCCCCCCCGGAACGGGCAAGACGTCGACGATCATTGCCCTCGCGCGCC 1018511 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAG---CGCGTGCTCGAGCTGAACGCTTCTGACG 254127 || || ||| || || || || |||||||| ||||||||||| || |||| Sbjct 1018512 AGCTCTTCGGCCCGG---ACCTGTTCAAGTCGCGCGTGCTGGAGCTGAACGCGTCCGACG 1018568 Query 254128 AACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTC---CAAGATGTCG---- 254180 | ||||| | ||||||||| || ||||||||||| || | | ||| | || Sbjct 1018569 AGCGCGGCATCTCCGTCGTCCGAGAGAAGATCAAGACGTTTGCGCGCGAGACGCCGCGCC 1018628 Query 254181 ---ATTTCGTCGTTCCAACC--CGGC------------TGTCCGCCTTTCAAGCTCGTGA 254223 | || ||| | | | |||| || ||||| | ||||||| | | Sbjct 1018629 ACAACCCCGGCGTCGCGAGCGACGGCATCTCATACCCGTGCCCGCCGTACAAGCTCATTA 1018688 Query 254224 TCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGG 254283 | || || ||||| ||| | |||||| ||||||||| ||||||| | || | |||| Sbjct 1018689 TTCTCGATGAGGCCGACTCGATGACGCAGGACGCGCAGAGCGCCCTCAGACGCATCATGG 1018748 Query 254284 AGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGT 254329 ||||| |||| | ||||| || || || |||||||| || || Sbjct 1018749 AGACGTACTCGAGGATCACGCGGTTCTGTCTCGTGTGCAATTATGT 1018794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073764804114688