Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq13 114 1e-20 seq6 82.4 6e-11 seq3 82.4 6e-11 >seq13 Length=1285846 Score = 114 bits (126), Expect = 1e-20 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| ||||||||||| || ||| | || || || || Sbjct 1261213 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTACGACCATCCTCGAGCTG 1261154 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 ||||||||||| |||| ||||| ||||| || || | ||||||||||||| ||| || Sbjct 1261153 CTTTCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGAATCTT 1261094 Query 45253 TTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCG 45311 ||| | || | || | ||||| ||| ||||| | || ||||||||||||| Sbjct 1261093 GCTCTTGA-CGTTGTCAATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTTGCCCG 1261035 Query 45312 TCAGAGTCTTCACAAAGATTTGCAT 45336 ||| ||||| |||||||| ||||| Sbjct 1261034 TCAACGTCTTGACAAAGATCTGCAT 1261010 >seq6 Length=2834147 Score = 82.4 bits (90), Expect = 6e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| |||||||||||| || ||| |||| || || || || |||||||| Sbjct 1117923 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1117864 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || | ||||| |||||||| || | ||||||||||||| Sbjct 1117863 GATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCC 1117824 >seq3 Length=3240826 Score = 82.4 bits (90), Expect = 6e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| |||||||||||| || ||| |||| || || || || |||||||| Sbjct 834984 CTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 835043 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || | ||||| ||||| ||||| | ||||||||||||| Sbjct 835044 GATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 835083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074641462436