Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 5e-12 seq16 82.4 7e-11 >seq2 Length=3385878 Score = 86.0 bits (94), Expect = 5e-12 Identities = 105/139 (76%), Gaps = 6/139 (4%) Strand=Plus/Plus Query 20928 GGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAG-TCTCCCGG 20986 || |||||||| | ||||||||||| |||||||||| | |||| | | ||| ||| Sbjct 3289382 GGCTCAACGTGATCCTTGTAAACGTGCGCGTCACCCA---TCTGCAGGATGAACTCGCGG 3289438 Query 20987 GG-TC-AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTA 21044 || || |||||||||| ||||||| || ||||||||| ||||| ||| || || Sbjct 3289439 GGCTCGCAGCCCGTGACGAACGCGATCATATGCGTCAGGAGTGCGTACGAGGCAATATTG 3289498 Query 21045 AACGGGACCCCGAGGCCCA 21063 ||||| || || ||||||| Sbjct 3289499 AACGGCACGCCCAGGCCCA 3289517 >seq16 Length=836766 Score = 82.4 bits (90), Expect = 7e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 21237 AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAA 21296 ||||| ||||| |||| ||| ||||| | | ||| | ||||||||| || || Sbjct 554296 AGCTGATCCACGCCCTTGCCCGTGTAGTCGTCCTCGCAGGTGCCGTACTCCGCGCCGAAG 554355 Query 21297 TGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGA 21351 || | |||||||||||| |||||||| || || ||||||||||| |||| |||| Sbjct 554356 TGCCGCCACTGGAACCCATACACCGGTCCGAGGTCGCCCTCGCGCCGGTGTCCGA 554410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775395231680