Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq16 111 2e-19 >seq16 Length=836766 Score = 111 bits (122), Expect = 2e-19 Identities = 274/411 (67%), Gaps = 5/411 (1%) Strand=Plus/Minus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || ||||| ||| |||||||||||| || | || | ||||| || |||||||| Sbjct 122587 CAGGCGAAGTCGGTGTGCAGACCCTCGTCGCGCGAGATGAGCTCGTTCGAGAACGTGAGG 122528 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 |||||||| || || ||||| || ||||| || || || || || || ||||| |||||| Sbjct 122527 CCGGGCATGAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAACGAGCCAGAGAAGAAG 122468 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCAC-TGTCATGT 42241 || || || || || || ||||| || || | ||| || | || | | |||| Sbjct 122467 ATACCCTCGACGGCGGCGAAGGCGATGAGGCGCTCGCCGAACGACGACCGCTTGTCCGAG 122408 Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301 ||||| | ||||| ||||||||||| || | ||||| ||||| || || || | Sbjct 122407 ATCCAGCGAAGCGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTGTCGATAGCCTGG 122348 Query 42302 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATT 42361 || || || | | || | || || ||||||| || ||| | Sbjct 122347 AACAGGTACTGACGGCGCGCGTTGTCGCGGATGTACGTGTCGATCAGGAGCGAGTACGTC 122288 Query 42362 TCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATC-TGGCCTCGGTAAC 42420 || || || ||||| || || ||||| ||||||||| ||| || ||||||| | | Sbjct 122287 TCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAG-AACGTCTTGGCCTCAGAGAT 122229 Query 42421 CTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTC 42471 ||| || ||| || || || || | | || ||||| ||||| ||||| Sbjct 122228 CTGGACCTCTCCGCAGAAGCGCTCGACGAGGTTCTCGTTGACTATGCCGTC 122178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138226848160