Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq13 89.7 4e-13 seq10 84.2 2e-11 >seq13 Length=1285846 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||| |||||| || ||||||||||||| | || | |||||||||||| Sbjct 1261440 TGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGAGAGGGTACGTCCATCCTCCAGCTGC 1261381 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || ||| || |||| | |||||||| ||| || | || ||||||||| || ||| Sbjct 1261380 TTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTC 1261321 Query 48644 TGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 ||||| | | || |||||||| | ||||| ||| | || || || || || | Sbjct 1261320 GACTTGACGTTGTCG--ATGGTATCCGAGGACTCAACCTCCAGAGTAATCGTCTTTCCAG 1261263 Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726 | ||||| || || || |||||||| Sbjct 1261262 TAAGAGTCTTGACGAAGATCTGCAT 1261238 >seq10 Length=2164251 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| || |||||||| || | | || ||||||| ||||||||||| || | Sbjct 2138939 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAA 2138880 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652 ||| | ||||||||| || || | | ||||||||| ||| ||| ||| | | Sbjct 2138879 AATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTCACGTT 2138820 Query 48653 GACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTC 48712 | || || || |||| ||||| ||||| || || || ||||| ||||| || ||| Sbjct 2138819 GTCG--ATCGTGTCGGACGACTCGACCTCGAGAGTGATCGTCTTACCCGTGAGGGTCTTC 2138762 Query 48713 ACAAAAATCTGCAT 48726 || || |||||||| Sbjct 2138761 ACGAAGATCTGCAT 2138748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250604456116