Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq5 167 4e-37 seq8 156 7e-34 seq12 143 4e-30 seq2 129 9e-26 >seq5 Length=2913187 Score = 167 bits (184), Expect = 4e-37 Identities = 181/240 (75%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| || ||||||||||| || ||||||||||| ||||| |||||||| ||||| ||||| Sbjct 2598677 TCTGCGCGATAACATCCAGGGCATCACCAAGCCTGCTATTCGTCGTCTCGCTCGCCGTGG 2598736 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||| ||||||||| | || || | |||| || |||| |||| ||| |||||||||| Sbjct 2598737 TGGTGTCAAGCGTATTTCCGGCCTCATCTACGAGGAGACCCGTGGTGTCCTGAAGATCTT 2598796 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 |||| ||| ||| || | || || || ||| || |||||||| || || |||||||| Sbjct 2598797 CCTCGAGAACGTCATTCGCGACTCTGTCACCTACACTGAGCACGCCAAGCGCAAGACTGT 2598856 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 ||| || | || ||||||| || | || || || ||||| | | || ||||| || Sbjct 2598857 CACTTCGCTCGACGTCGTCTACGCCCTCAAGCGCCAGGGCCGCACCCTCTACGGTTTCGG 2598916 >seq8 Length=2605587 Score = 156 bits (172), Expect = 7e-34 Identities = 178/239 (74%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || |||||||| || || ||||||||||| |||||||| ||||| ||||| |||||| Sbjct 1861388 CTCCGTGATAACATTCAGGGCATCACCAAGCCCGCTATCCGCCGTCTCGCTCGCCGTGGT 1861329 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || ||||||||| |||| || | | || || |||| |||| ||| ||||||||||| Sbjct 1861328 GGTGTCAAGCGTATCTCCGGTCTCATTTACGAGGAGACCCGTGGTGTCCTGAAGATCTTC 1861269 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 || ||| ||| |||| || | || ||| || |||||||| || || ||||| ||| Sbjct 1861268 CTTGAGAACGTCATCCGCGACTCGGTCACCTACACTGAGCACGCCAAGCGCAAGACCGTC 1861209 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 ||||| | || ||||||| || | || || || ||||| | | || ||||| || Sbjct 1861208 ACCTCGCTCGACGTCGTCTACGCCCTCAAGCGCCAGGGCCGCACCCTCTACGGTTTCGG 1861150 >seq12 Length=1415948 Score = 143 bits (158), Expect = 4e-30 Identities = 175/239 (73%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || ||||||||||| || |||||||| || ||||| ||||| ||||| ||||| Sbjct 1092902 CTGCGTGACAACATCCAAGGCATTACCAAGCCCGCCATCCGCCGTCTCGCTCGCCGTGGC 1092961 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || |||||| | || || | |||| || |||| |||| ||| | ||||||||| Sbjct 1092962 GGTGTGAAGCGTATTTCCGGCCTCATCTACGAGGAGACCCGTGGTGTCCTCAAGATCTTC 1093021 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 ||| ||| ||| |||| || | || ||| || |||||||| || || ||||| ||| Sbjct 1093022 CTCGAGAACGTCATCCGCGACTCGGTCACCTACACTGAGCACGCCAAGCGCAAGACCGTC 1093081 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 ||||| | || ||||||| || | || || || ||||| | | ||||| || || Sbjct 1093082 ACCTCGCTCGACGTCGTCTACGCCCTCAAGCGCCAGGGCCGCACCCTCTATGGCTTCGG 1093140 >seq2 Length=3385878 Score = 129 bits (142), Expect = 9e-26 Identities = 174/241 (72%), Gaps = 1/241 (0%) Strand=Plus/Minus Query 16453 TCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTG 16511 |||| || |||||||| ||||| || || ||||| |||||||| ||||| ||||| |||| Sbjct 1105570 TCTTGCGCGATAACATTCAAGGTATTACGAAGCCCGCTATCCGCCGTCTCGCTCGCCGTG 1105511 Query 16512 GTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCT 16571 | || || |||||| | || || | |||| || |||| |||| ||| | ||||||| Sbjct 1105510 GCGGTGTGAAGCGTATTTCCGGCCTCATCTACGAGGAGACCCGTGGTGTCCTCAAGATCT 1105451 Query 16572 TCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTG 16631 |||| ||| ||| |||| || | || ||| || |||||||| || || ||||| | Sbjct 1105450 TCCTGGAGAACGTCATCCGCGACTCGGTCACCTACACTGAGCACGCCAAGCGCAAGACCG 1105391 Query 16632 TCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTG 16691 ||||||| | || | || || || | || || || ||||| | | || ||||| | Sbjct 1105390 TCACCTCGCTCGACGTTGTTTACGCGCTCAAGCGCCAGGGCCGCACCCTCTACGGTTTCG 1105331 Query 16692 G 16692 | Sbjct 1105330 G 1105330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075093940388