Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq8 102 1e-16 seq4 82.4 9e-11 seq2 82.4 9e-11 seq1 82.4 9e-11 >seq8 Length=2605587 Score = 102 bits (112), Expect = 1e-16 Identities = 134/181 (74%), Gaps = 6/181 (3%) Strand=Plus/Plus Query 137932 TGCGGCACGTGAATGTTCATCTCGTCGCCGTCAAAGTCGCAGTTGAAGGGCTTCGTTATG 137991 ||||| ||||| | |||||||||||| ||||| || ||| |||| |||| ||| | Sbjct 409959 TGCGGGACGTGCAAGTTCATCTCGTCTCCGTCGAAATCGGCGTTGTAGGGGGACGTGACC 410018 Query 137992 GCCAGGTTGATTTTGAGCGTCTTGACTGGTTTGATGACCACCTTA--AAGGC-CATCATG 138048 | |||||| | || || |||| | | || |||||| | | | | | ||||||| Sbjct 410019 GACAGGTTCAGACGGAACG--TTGAGTAG-TTCATGACCTTCACACGATGACTCATCATG 410075 Query 138049 GACGCCTTGTGCAGCGTCGGTTGCCGGTTGAGCAGCACGTAGTCGCCGTCCATCAGCTGC 138108 ||| |||||| |||| |||||| ||||||| |||||||| ||||||||| |||| ||| Sbjct 410076 GACATCTTGTGGAGCGACGGTTGACGGTTGAAGAGCACGTAATCGCCGTCCTTCAGATGC 410135 Query 138109 C 138109 | Sbjct 410136 C 410136 >seq4 Length=3236612 Score = 82.4 bits (90), Expect = 9e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 15054 AGATTGGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCC 15113 ||||||| |||||||| ||| || | || ||||| ||| ||| || | | | Sbjct 1857238 AGATTGGTGACAAGTTCGCCTCGCGTCACGGACAGAAGGGTACGATCGGTATCACCTATC 1857297 Query 15114 CCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAACCCCA 15173 |||||| |||||||| || || || ||||| || |||||||| |||||||||||| Sbjct 1857298 GCCAGGAGGACATGCCGTTCACGGCTGAGGGCATCACTCCCGACATCATCATCAACCCCC 1857357 Query 15174 ACTGCATCCCGTCCCGCATGACCAT 15198 || ||| ||||| || ||||| || Sbjct 1857358 ACGCCATTCCGTCTCGTATGACAAT 1857382 >seq2 Length=3385878 Score = 82.4 bits (90), Expect = 9e-11 Identities = 129/180 (72%), Gaps = 6/180 (3%) Strand=Plus/Minus Query 137931 CTGCGGCACGTGAATGTTCATCTCGTCGCCGTCAAAGTCGCAGTTGAAGGGCTTCGTTAT 137990 ||| || ||||| | |||||||||||| ||||| |||||| |||| | || ||| | Sbjct 2141435 CTGAGGAACGTGCAGGTTCATCTCGTCTCCGTCGAAGTCGGCGTTGTACGGGGACGTGAC 2141376 Query 137991 GGCCAGGTTGATTTTGAGCGTCTTGACTGGTTTGATGACCACCTTA--AAGGC-CATCAT 138047 | ||||| | || |||| || | ||| |||||| | | | | | |||||| Sbjct 2141375 CGAAAGGTTCAGACGGAACGTC--GAGTAGTTC-ATGACCTTCACACGATGACTCATCAT 2141319 Query 138048 GGACGCCTTGTGCAGCGTCGGTTGCCGGTTGAGCAGCACGTAGTCGCCGTCCATCAGCTG 138107 |||| |||||| || | ||| || ||||||| |||||||||||||| ||| |||| || Sbjct 2141318 GGACATCTTGTGAAGTGACGGCTGACGGTTGAAGAGCACGTAGTCGCCATCCTTCAGATG 2141259 >seq1 Length=3718887 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 15056 ATTGGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCCCC 15115 || |||||||||||| || || | || ||||| ||| ||| || | | || Sbjct 1557144 ATCGGCGACAAGTTTGCGTCGCGTCACGGACAGAAGGGTACGATCGGTATCACATACCGG 1557085 Query 15116 CAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAACCCCAAC 15175 || || ||||||||||| || || |||||| ||||| ||||| ||||||||||| || Sbjct 1557084 CAAGAGGACATGCCCTTCACGGCCGAAGGCATCACGCCTGACATCATCATCAACCCGCAC 1557025 Query 15176 TGCATCCCGTCCCGCATGACCAT 15198 ||| || ||||| |||||||| Sbjct 1557024 GCCATTCCATCCCGTATGACCAT 1557002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611391113481600