Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq16 113 6e-20 seq2 109 7e-19 >seq16 Length=836766 Score = 113 bits (124), Expect = 6e-20 Identities = 168/236 (71%), Gaps = 3/236 (1%) Strand=Plus/Minus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || ||||| ||| ||| ||||||||||| | || | ||||| || |||||||| Sbjct 122587 CAGGCGAAGTCGGTGTGCAGACCCTCGTCGCGCGAGATGAGCTCGTTCGAGAACGTGAGG 122528 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 |||||||| || || ||||| || ||||| || ||||| || || || ||||| ||||| Sbjct 122527 CCGGGCATGAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAACGAGCCAGAGAAGAAG 122468 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCGC-TGTCATGT 32837 || || || || || || ||||| || || | ||| || | || ||| |||| Sbjct 122467 ATACCCTCGACGGCGGCGAAGGCGATGAGGCGCTCGCCGAACGACGACCGCTTGTCCGAG 122408 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 32893 ||||| | ||||| ||||||||||| || | ||||| || || || ||||| Sbjct 122407 ATCCAGCGAAGCGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTGTCGATAGC 122352 >seq2 Length=3385878 Score = 109 bits (120), Expect = 7e-19 Identities = 166/236 (70%), Gaps = 3/236 (1%) Strand=Plus/Minus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || ||||| ||| ||| ||||||||||| | || | |||||||| |||||||| Sbjct 2876892 CAGGCGAAGTCGGTGTGGAGACCCTCGTCGCGCGAGATGAGCTCGTTGGAGAACGTGAGG 2876833 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 |||||||| ||||| ||||| || ||||| || |||||||| || || || || ||||| Sbjct 2876832 CCGGGCATGAGGCCGCGCTTCTTCAGCCAGAAGATGGACGCGAACGAGCCTGAGAAGAAG 2876773 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC---TGTCATGT 32837 || || || || || || || || || || | ||| || | || || ||| Sbjct 2876772 ATACCCTCAACGGCAGCGAACGCGATGAGGCGCTCGCCGAACGAGGAGCGTTGGTCGGAA 2876713 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 32893 |||||| | ||||| ||||||||||| || | || || || || || || || Sbjct 2876712 ATCCACCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGC 2876657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631081233600