Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq13 118 9e-22 seq3 107 2e-18 seq6 102 7e-17 seq10 98.7 8e-16 seq1 93.3 4e-14 >seq13 Length=1285846 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || || ||| | ||||| || || || || | Sbjct 1261238 ATGCAGATCTTCGTCAAGACTCTTACTGGAAAGACGATTACTCTGGAGGTTGAGTCCTCG 1261297 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || || || ||||||||||||||||| || || || Sbjct 1261298 GATACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAG 1261357 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | |||||| || ||| |||| ||||||||| Sbjct 1261358 CAGCGCCTGATTTTCGCCGGCAAGCAGCTGGAGGATGGACGTACCCTCTCTGATTACAAC 1261417 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || ||||| | || | || | || |||| |||||| Sbjct 1261418 ATCCAGAAGGAGTCCACTCTGCACCTCGTCCTTCGTCTGCGTGGAGGT 1261465 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || || ||| |||| ||||| || || || | Sbjct 1261010 ATGCAGATCTTTGTCAAGACGTTGACGGGCAAGACGATCACGCTTGAGGTTGAGTCCTCG 1261069 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || ||||| ||||||||||||||||| || || || Sbjct 1261070 GACACGATTGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCGGACCAG 1261129 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || ||||| || ||| | |||||| || || |||| || |||||| Sbjct 1261130 CAGCGCCTGATTTTCGCCGGAAAGCAGCTCGAGGATGGTCGTACTCTCTCTGACTACAAC 1261189 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || |||||| | || | ||| | || |||| || ||| Sbjct 1261190 ATCCAGAAGGAGTCCACCCTCCACCTTGTTCTCCGCCTGCGTGGTGGT 1261237 >seq3 Length=3240826 Score = 107 bits (118), Expect = 2e-18 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 |||||||| || ||||||| || || || || | || ||| | ||| | |||| Sbjct 835151 ACCGGTAAGACCATCACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAGTCG 835092 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||||||||| || || || || || ||||| || || |||||||| Sbjct 835091 AAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTCATCTTCGCCGGCAAG 835032 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| ||||||| | ||||| |||||||| || || || || ||| Sbjct 835031 CAGCTCGAGGACGGCCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCGACC 834978 >seq6 Length=2834147 Score = 102 bits (112), Expect = 7e-17 Identities = 127/174 (73%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 |||||||| || | ||||| || || || || | || ||| | ||| | |||| Sbjct 1117756 ACCGGTAAGACCATTACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAGTCG 1117815 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||||||||| || ||||| || || ||||| || || |||||||| Sbjct 1117816 AAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGCAAG 1117875 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| |||||| | ||||| |||||||| || || || || ||| Sbjct 1117876 CAGCTCGAGGACGGCCGCACTCTTTCCGACTACAACATCCAGAAGGAGTCGACC 1117929 >seq10 Length=2164251 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || ||||| ||| ||||||| || || || | || Sbjct 2138748 ATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACGATCACTCTCGAGGTCGAGTCGTCC 2138807 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || ||||| ||||||||||| ||||| || || || Sbjct 2138808 GACACGATCGACAACGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 2138867 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | ||||| ||||||| |||| || |||||| Sbjct 2138868 CAGCGTCTCATTTTCGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAAC 2138927 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 2138928 ATCCAGAAGGAGTCGAC 2138944 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || || || ||||||| || || || | || Sbjct 2138520 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATCACTCTCGAGGTCGAGTCGTCC 2138579 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || || || ||||||||||| || || ||||| || Sbjct 2138580 GACACGATCGACAATGTCAAGTTGAAGATCCAGGACAAGGAGGGGATCCCCCCCGACCAG 2138639 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || || || ||| | |||||| ||||| ||||||| |||||| Sbjct 2138640 CAGCGCCTGATCTTCGCTGGAAAGCAGCTCGAGGATGGACGCACGCTCTCCGACTACAAC 2138699 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 2138700 ATCCAGAAGGAGTCGAC 2138716 >seq1 Length=3718887 Score = 93.3 bits (102), Expect = 4e-14 Identities = 125/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || || | || ||| | ||| | |||| Sbjct 1833932 ACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAGTCC 1833991 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || ||||| || || ||||| || || |||||||| Sbjct 1833992 AAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGCAAG 1834051 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| ||||||| | || || |||||||| || || || || ||| Sbjct 1834052 CAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACC 1834105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727406609540