Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq16 150 2e-31 seq2 129 6e-25 seq67 102 8e-17 seq10 100 3e-16 seq13 96.9 3e-15 seq6 87.8 2e-12 seq3 87.8 2e-12 >seq16 Length=836766 Score = 150 bits (166), Expect = 2e-31 Identities = 298/437 (68%), Gaps = 7/437 (2%) Strand=Plus/Plus Query 52394 CGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGC 52453 ||||||| | | ||||||||| |||||||| | || || || ||| || ||| | Sbjct 122432 CGAGCGCCTCATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCGTTCGCCTC 122491 Query 52454 CATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGAT 52513 |||||| | | || | | || | ||||||||||| |||||| |||||| | || Sbjct 122492 CATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGCCTCACGTTCTCGAACGAGCTCAT 122551 Query 52514 ATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAG-ACGCGCGTGA 52572 ||||||||||| || |||||||| ||||| || ||||| || || | || || Sbjct 122552 CTCGCGCGACGAGGGTCTGCACACCGACTTCGCCTGCCTGCTCTTCACGCACCTCCGCCG 122611 Query 52573 CCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAA 52632 ||| | | ||||||||||| | || ||||||||||||| ||||| Sbjct 122612 CCGGCC----GCACCCGGACACGATCAACAAGATCATCAAGGAGGCGGTCAAGATCGAGC 122667 Query 52633 AGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGT 52692 ||||||| | || | || || || ||| ||| | ||||||||||| || ||||| Sbjct 122668 AGGAGTTCCTGACCGAGGCCCTCCCCGTCTCGCTCATCGGCATGAACGCCAAGCTCATGT 122727 Query 52693 GCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTAC 52751 || ||||||| ||||| || || || || || | || ||| |||| | | ||| | Sbjct 122728 GCCAGTACATTGAGTTCGTCGCCGACCGCCTCCTCGTCGCCCTC-GGCAACGACAAGCTC 122786 Query 52752 TTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAAC 52811 | ||| | ||| || || || || ||| | | || ||||| |||||||| ||||| Sbjct 122787 TGGAACTCGTCCAACCCCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGGCCAAC 122846 Query 52812 TTTTTCGAGAAGCGAGT 52828 || |||||| ||| || Sbjct 122847 TTCTTCGAGTCGCGTGT 122863 >seq2 Length=3385878 Score = 129 bits (142), Expect = 6e-25 Identities = 494/758 (65%), Gaps = 21/758 (3%) Strand=Plus/Plus Query 52086 AACGATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGC 52145 ||||| | ||||||| || ||| ||||||| | |||||||||||||| | ||| || Sbjct 2876429 AACGACAATGAGCGCTTCTTCATCGAGCACGTCCTCGCGTTCTTCGCCGCGTCGGATGGC 2876488 Query 52146 ATCGTGAACATTAACCTCATCGAGTACATGCAGCGGAACGTTCCGGAACTC-GAGGCGCA 52204 ||||| ||| |||||| | ||| | | | |||| | ||| || ||| ||||| || Sbjct 2876489 ATCGTCAACGAAAACCTCGTGGAGCGCTT-CTGCGGCGAGGTCCAGATCTCCGAGGC-CA 2876546 Query 52205 ATACTTT-TATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGC 52263 | || || || ||| || | | || ||| | | || |||||| |||| || | Sbjct 2876547 AGACGTTCTACGGTTTCCAGATCATGATGGAGAACATCCATTCGGAGACGTACTCGCTCC 2876606 Query 52264 TCATTGAGCAGCTGATAAAAGATGAGCACGAGCGCGACACGCTGCTGA---ATGCGTTCG 52320 |||| || || | | | | || ||| |||| | | | ||| | || ||| Sbjct 2876607 TCATCGA-CACGT-ACATCCGC-GACAACGCGCGCCGCCAGTTCCTGTTCCAGGCCATCG 2876663 Query 52321 AGCACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGA-GAGCGAC 52379 | | | || ||| | || ||||| | ||||| || |||||| || | || Sbjct 2876664 ACACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCCCTGCGGTGGATTTCCGACCAAC 2876723 Query 52380 ACCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCC 52439 | || || | | ||||||| | | || ||||| || ||||| | || || || Sbjct 2876724 GCT-CCTCGTTCGGCGAGCGCCTCATCGCGTTCGCTGCCGTTGAGGGTATCTTCTTCTCA 2876782 Query 52440 GGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTC 52499 ||| || || ||||||| | | || | | ||| | ||||||||||| |||||| Sbjct 2876783 GGCTCGTTCGCGTCCATCTTCTGGCTGAAGAAGCGCGGCCTCATGCCCGGCCTCACGTTC 2876842 Query 52500 AGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTAC 52559 ||||||| | || ||||||||||| || || ||||| ||||| || ||||| || | Sbjct 2876843 TCCAACGAGCTCATCTCGCGCGACGAGGGTCTCCACACCGACTTCGCCTGCCTGCTCTTC 2876902 Query 52560 AAG-ACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGC 52618 | || || ||| | ||||||||||| | || |||||||||| Sbjct 2876903 ACCCACCTCCGCCGCCGTCCCC----ACCCGGACACGATCAACAAGATCATCAAGGAGGC 2876958 Query 52619 GGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAA 52678 || || || ||||||| | || | || || ||||| ||| | |||||||| Sbjct 2876959 CGTCAAGATTGAGCAGGAGTTCCTCACCGAGGCCCTCCCGGTGTCGCTCATCGGCATGAA 2877018 Query 52679 CGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGG 52738 ||| || ||||||| ||||||||||||| || || || ||||| | || | | | Sbjct 2877019 CGCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGTCTCCTCGT-CGCCCTTG 2877077 Query 52739 GCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTG 52797 ||| | | ||| || ||| | ||| || || || || ||| | | || ||||| Sbjct 2877078 GCAACGACAAGATCTGGAACTCGGCCAACCCCTTCGACTTCATGGAGATGATCTCGCTGC 2877137 Query 52798 AGGGCAAGACCAACTTTTTCGAGAAGC--GAGTCGGCG 52833 | |||||| ||||||| |||||| || | ||||||| Sbjct 2877138 AAGGCAAGGCCAACTTCTTCGAGTCGCGTGTGTCGGCG 2877175 Score = 86.0 bits (94), Expect = 6e-12 Identities = 325/502 (65%), Gaps = 15/502 (3%) Strand=Plus/Minus Query 153597 GCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGG-CGTCGCTGTACTGCACGATCTC 153655 || || || || || || |||||||| ||| |||| || | ||||| | |||||| Sbjct 568680 GCGATCGAGGCAAGGTTGCAGACGGCGACCTCATCGGGCGAAGA-GTACTCGATGATCTC 568622 Query 153656 GGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCA 153715 | |||||||||| | || || ||| | | || || || ||||| || Sbjct 568621 AGTGCAGAGGTTGGATGACTTGATAGTGCCGAGGTGCTGTTGGTTCGACTTGCGGTTCGC 568562 Query 153716 CGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATA---AA 153772 ||||| ||| |||||||| | || || |||||||| |||| || | ||| || Sbjct 568561 GGCGTCCTTGTAGAGCATGAAGGGGCCACCGGTCTCAGTCTGCGCCTCCAAGATGGCGAA 568502 Query 153773 CCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTC 153832 || ||| | ||| || | || ||| ||| ||| |||||| | ||| Sbjct 568501 CCA---CAGCTTCTGGGCCTTGATGGTCTTGCGACCCTTGCCGGCGCGCTCGTAGCTCTC 568445 Query 153833 GTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACA 153892 ||||| |||| ||||| || || || | ||||||||| |||| | || || Sbjct 568444 ATACAGCTGCTCGAACTCCTCAGAGTGTACATCAGAGAGGCCGGGGCACTCAGCAGGGCA 568385 Query 153893 CATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAG 153952 ||| || | ||| |||||| | ||| || ||||||||| || | | |||||| Sbjct 568384 CATGAGGGTCCAGTCGCCGTCGGACTCGACACGCTTCATGAACAGGTCGGAGATCCAGAG 568325 Query 153953 CGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGA--TTG 154010 ||||| | ||||| ||||| | || ||| ||| || | | || | || | | Sbjct 568324 GGCGTAGAAAAGGTCACGCGCACGGACCTCTTCCTT-CCCGTGGTTC-TTACGGAGGTCG 568267 Query 154011 AGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC 154070 || | | | |||||||||||||||| || |||| ||||| ||| | |||||| ||| Sbjct 568266 AGGAAGTCAAAGATGTCGGCGTGCCAAGGCTCAAGGTAGATGGCGAAGGCACCGGGCCGC 568207 Query 154071 ---TTTCCGCCCTGATCGACGT 154089 || || ||||| || |||| Sbjct 568206 TTGTTACCACCCTGGTCAACGT 568185 >seq67 Length=19140 Score = 102 bits (112), Expect = 8e-17 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 57300 GGCCTCGACGTTGCCCAAGTCGCCGACGTGCCGCACGGCCGCGTTGGGAGCGCCGTGTTC 57359 || || ||||||||| | ||| |||||||| ||| | || || | ||| | ||||| | Sbjct 5779 GGTCTTGACGTTGCCAAGGTCACCGACGTGACGCTCAGCGTCGGTCGGACCACCGTGGTG 5838 Query 57360 GCTGCCGGTGGGGTTAAAGTGCTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAA 57419 |||| |||||||||||| |||||||||||| |||||||||||| |||| ||||| Sbjct 5839 CTTGCCATGGGGGTTAAAGTGGGAGCCCGCCGACGTACAGCCGTTGCTGTTGTCACCGAA 5898 Query 57420 CTCGTG 57425 || ||| Sbjct 5899 CTGGTG 5904 >seq10 Length=2164251 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || ||||||||| || ||||| | Sbjct 2138941 GACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCG 2138882 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 | || |||||||| ||||| ||||| || || || ||||| ||| | || | || | Sbjct 2138881 AAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTC-CTGAATCTTCGACTTCAC 2138823 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||||| |||||| ||||||| || | ||| ||||| || || || | Sbjct 2138822 GTTG-TCGATCGTGTCGGACGACTCGACCTCGAGAGTGATCGTCTTACCCGTGAGGGTCT 2138764 Query 138599 TTACAAAAATCTGCAT 138614 | || || |||||||| Sbjct 2138763 TCACGAAGATCTGCAT 2138748 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||||| || || || | Sbjct 2138713 GACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGTCCATCCTCGAGCTGCTTTCCAGCG 2138654 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || ||||| ||||| || || || || || ||||| ||| || || | | Sbjct 2138653 AAGATCAGGCGCTGCTGGTCGGGGGGGATCCCCTCCTTGTCCTGGATCTTCAACTTGACA 2138594 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 |||| | | ||||||| |||||| ||||||| || | || || ||||||||||| || Sbjct 2138593 TTGT-CGATCGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCAGTCAGAGTCTT 2138535 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 2138534 GACGAAGATCTGCAT 2138520 >seq13 Length=1285846 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| || | ||| | || | | | |||||||| || ||||||||||| Sbjct 1261236 CCACCACGCAGGCGGAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 1261177 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| |||||||| || || |||| | || || ||||| |||||||| || Sbjct 1261176 AGAGTACGACCATCCTCGAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGA 1261117 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| ||| | || | || | ||| || | ||||| | ||||| | Sbjct 1261116 ATACCCTCCTTGTC-CTGAATCTTGCTCTTGACGTTG-TCAATCGTGTCCGAGGACTCAA 1261059 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | ||| | ||| || || |||| || || ||||| |||||||| Sbjct 1261058 CCTCAAGCGTGATCGTCTTGCCCGTCAACGTCTTGACAAAGATCTGCAT 1261010 Score = 89.7 bits (98), Expect = 5e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| | ||| | | |||||||| || |||||||||||| | Sbjct 1261008 CCACCGCGGAGACGAAGAACAAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 1260949 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||||||| || || || | |||| |||||||| ||||| ||||| Sbjct 1260948 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGG 1260889 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || || | | || | |||||||| |||||| ||| Sbjct 1260888 ATGCCTTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGGACGACTCAACC 1260829 Query 138568 TC 138569 || Sbjct 1260828 TC 1260827 >seq6 Length=2834147 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||| || ||||||||| || || |||| Sbjct 1117925 GACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCG 1117866 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||| || || ||||| || ||||| ||| || || | Sbjct 1117865 AAGATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACG 1117806 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAG 138593 | || | |||||| | ||||| ||||||| || | || ||||| || || Sbjct 1117805 TTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTAATGGTCTTACCGGTGAG 1117753 >seq3 Length=3240826 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || ||||||||| || || |||| Sbjct 834982 GACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCG 835041 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||| ||||| ||||| || ||||| ||| || || | Sbjct 835042 AAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACG 835101 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAG 138593 | || | |||||| | ||||| ||||||| || | || ||||| || || Sbjct 835102 TTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTACCGGTGAG 835154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261680419520