Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq10 132 5e-26 seq2 116 4e-21 seq16 111 1e-19 seq13 93.3 4e-14 seq6 91.5 1e-13 seq3 91.5 1e-13 seq1 87.8 2e-12 seq4 82.4 7e-11 >seq10 Length=2164251 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||||||||| | || | || | ||| | || ||||| || || || ||||| ||| Sbjct 2138747 TCCACCGCGGAGACGGAGGACAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 2138688 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | |||||| ||| || ||||| ||||||||| |||||| |||||||| ||||| || Sbjct 2138687 GAGCGTGCGTCCATCCTCGAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCGGGGGG 2138628 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| ||| ||||| | |||| ||||| | |||||| Sbjct 2138627 GATCCCCTCCTTGTCCTGGATCTTCAACTTGACATTGTCGATCGTGTCGGACGACTCGAC 2138568 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || ||||| |||||||| || || || |||||||| Sbjct 2138567 CTCGAGAGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 2138520 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| ||||| || || || ||||| || | ||||| || || ||||| || || Sbjct 2138945 CGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTACC 2138886 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 |||| | || | |||||||| || ||||| ||||||||||||||| || ||| ||| Sbjct 2138885 AGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTT 2138826 Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | |||| |||| ||||| | |||||| |||| || | ||| || || || || | Sbjct 2138825 CACGTTG-TCGATCGTGTCGGACGACTCGACCTCGAGAGTGATCGTCTTACCCGTGAGGG 2138767 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || || || |||||||| Sbjct 2138766 TCTTCACGAAGATCTGCAT 2138748 Score = 84.2 bits (92), Expect = 2e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 126950 GTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATG 127009 || ||| ||| || ||||| || ||||| |||| | |||||||| ||||| || || Sbjct 2138400 GTACGACCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGGGGGATC 2138341 Query 127010 CCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTC 127068 |||||||||||| || ||| ||||| |||| || | |||||| | |||||| || Sbjct 2138340 CCCTCCTTGTCCTGAATCTTCGACTTGACGTTG-TCAATGGTGTCAGACGACTCGACCTC 2138282 Query 127069 GACGGTCACCGTTTTGCCGGTCAGAGTTTT 127098 || ||| | || |||||||| || || || Sbjct 2138281 GAGGGTGATGGTCTTGCCGGTGAGCGTCTT 2138252 >seq2 Length=3385878 Score = 116 bits (128), Expect = 4e-21 Identities = 340/521 (65%), Gaps = 11/521 (2%) Strand=Plus/Plus Query 47059 TCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACG 47118 |||| | ||| |||||| | | |||||||| |||||| || || ||| || Sbjct 2876661 TCGACACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCCCTGCGGTGGATTTCCGACC 2876720 Query 47119 AAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCT 47178 || | | | | | ||| || | ||||| ||||| ||| ||||| ||||||||| Sbjct 2876721 AACGCTCCTCGTTCGGCGAGCGCCTCATCGCGTTCGCTGCCGTTGAGGGTATCTTCTTCT 2876780 Query 47179 CGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGT 47238 | ||| || ||| | || || | |||| | || | |||||||||||||||| Sbjct 2876781 CAGGCTCGTTCGCGTCCATCTTCTGGCTGAAGAAGCGCGGCCTCATGCCCGGCCTCACGT 2876840 Query 47239 TTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACT 47298 | ||||||||| |||||| | ||||| || || |||||| |||| ||||| || || Sbjct 2876841 TCTCCAACGAGCTCATCTCGCGCGACGAGGGTCTCCACACCGACTTCGCCTGCCTGCTCT 2876900 Query 47299 ACA-ACACTAGAGTCG--ATCAAAAGTTGGACGTGCCCACCGTCAGCGACATGTTTGCCG 47355 || ||| | || || | ||| ||| ||| | | || | | Sbjct 2876901 TCACCCACCTCCGCCGCCGTCCCCACCCGGA------CACGATCAACAAGATCATCAAGG 2876954 Query 47356 AAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAA 47415 | |||||| |||||| |||||| || ||||||| || || | || | | || | Sbjct 2876955 AGGCCGTCAAGATTGAGCAGGAGTTCCTCACCGAGGCCCTCCCGGTGTCGCTCATCGGCA 2877014 Query 47416 TGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGC 47475 ||||||| || | ||| | |||||||||| || ||||||||||| || ||||| | Sbjct 2877015 TGAACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGTCTCCTCGTCGCCC 2877074 Query 47476 TAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGC 47535 | | |||||| | || | | || || ||||| || ||| | | || |||| Sbjct 2877075 TTGGCAACGACAAGATCTGGAACTCGGCCAACCCCTTCGACTTCATGGAGATGATCTCGC 2877134 Query 47536 TCGAGGGCAAGACCAACTTTTTCGAGAAGC--GCGTCGGCG 47574 | | |||||| ||||||| |||||| || | ||||||| Sbjct 2877135 TGCAAGGCAAGGCCAACTTCTTCGAGTCGCGTGTGTCGGCG 2877175 Score = 95.1 bits (104), Expect = 1e-14 Identities = 168/242 (69%), Gaps = 5/242 (2%) Strand=Plus/Minus Query 47061 GAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAA 47120 |||| ||| |||||| | | | ||||| || ||||| |||||||||||| | ||| Sbjct 3154875 GAGAACATCCCCTGCATCCAAAAGAAGGCAGACTGGGCGATGAAGTACATT---ACCGAC 3154819 Query 47121 AACGTCACTCTGGCCGA-ACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTC 47179 | || || | | || ||||||||| || || ||| || |||||| |||| ||||| Sbjct 3154818 GAGGTGCCTTTC-CGGATACGTTTGATTGCGTTTGCCTGTGTGGAGGGCATCTTTTTCTC 3154760 Query 47180 GGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTT 47239 ||| ||||||||||| || | |||| | || | |||| ||||| || || Sbjct 3154759 GGGGTCGTTTGCGGCGATCTTCTGGCTGAAGAAGCGTGGTCTCATGCAAGGCCTGACCTT 3154700 Query 47240 TAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTA 47299 || ||||| ||| ||||||| || |||||||| ||||||| ||||| ||| Sbjct 3154699 CTCGAATGAGCTCATCAGTCGAGACGAGGGTCTGCACACGGACTTTGCTTGTCTTCTCTA 3154640 Query 47300 CA 47301 || Sbjct 3154639 CA 3154638 >seq16 Length=836766 Score = 111 bits (122), Expect = 1e-19 Identities = 281/426 (66%), Gaps = 5/426 (1%) Strand=Plus/Plus Query 47145 ATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTAC 47204 ||||| |||||| ||||||||| |||||||||| ||| || || | || || | Sbjct 122442 ATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCGTTCGCCTCCATCTTCTGG 122501 Query 47205 ATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGAC 47264 |||| | || | ||||||||||||||||| |||||||| |||||| | ||| Sbjct 122502 CTGAAGAAGCGCGGTCTCATGCCCGGCCTCACGTTCTCGAACGAGCTCATCTCGCGCGAC 122561 Query 47265 GAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACA-ACACTAGAGTCGATCAAAAGTT 47323 || || ||||||||| |||| ||||| || || || ||| || | | Sbjct 122562 GAGGGTCTGCACACCGACTTCGCCTGCCTGCTCTTCACGCAC----CTCCGCCGCCGGCC 122617 Query 47324 GGACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTT 47383 | || | ||| ||| | | || | || || ||| || ||| |||||| | Sbjct 122618 GCACCCGGACACGATCAACAAGATCATCAAGGAGGCGGTCAAGATCGAGCAGGAGTTCCT 122677 Query 47384 CGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACAT 47443 ||||||| || |||| || | | || |||||||| || | ||| | ||||||| Sbjct 122678 GACCGAGGCCCTCCCCGTCTCGCTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACAT 122737 Query 47444 CGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGA 47503 || || |||||||||||||| ||||| || | |||| | | || | Sbjct 122738 TGAGTTCGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGACAAGCTCTGGAACTCGTC 122797 Query 47504 GAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAA 47563 || || ||||| || ||| | | || |||||| |||||||| ||||||| |||||| Sbjct 122798 CAACCCCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCGAGTC 122857 Query 47564 GCGCGT 47569 ||| || Sbjct 122858 GCGTGT 122863 >seq13 Length=1285846 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || |||||||| | || || ||| || ||||| || || Sbjct 1261434 GTGGACTCCTTCTGGATGTTGTAATCAGAGAGGGTACGTCCATCCTCCAGCTGCTTGCCG 1261375 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | |||| |||||||| || || || || |||||||||||| ||| ||| |||| Sbjct 1261374 GCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTCGACTTG 1261315 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||| |||| ||| || || | || | ||| || || || ||||| Sbjct 1261314 ACGTTG-TCGATGGTATCCGAGGACTCAACCTCCAGAGTAATCGTCTTTCCAGTAAGAGT 1261256 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 1261255 CTTGACGAAGATCTGCAT 1261238 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | || ||| ||| || ||||| ||||| Sbjct 1261206 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTACGACCATCCTCGAGCTGCTTTCCG 1261147 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | |||| |||||||| || || || || |||||||||||| || || |||| Sbjct 1261146 GCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGAATCTTGCTCTTG 1261087 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | ||||||| ||| || || | || | ||| ||||| |||| || Sbjct 1261086 ACGTTG-TCAATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTTGCCCGTCAACGT 1261028 Query 127096 TTTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 1261027 CTTGACAAAGATCTGCAT 1261010 >seq6 Length=2834147 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | ||||| || || ||||| || || Sbjct 1117928 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCG 1117869 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| ||||| || || |||||||||||| ||| ||| |||| Sbjct 1117868 GCGAAGATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTG 1117809 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAG 127092 | |||| |||| |||||||| |||||| |||| || | || || ||||| || Sbjct 1117808 ACGTTG-TCGATGGTGTCCGAGGACTCGACCTCGAGAGTAATGGTCTTACCGGTGAG 1117753 >seq3 Length=3240826 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | ||||| || || ||||| || || Sbjct 834979 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 835038 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || ||||| || |||||||||||| ||| ||| |||| Sbjct 835039 GCGAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTG 835098 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAG 127092 | |||| |||| |||||||| |||||| |||| || | || || ||||| || Sbjct 835099 ACGTTG-TCGATGGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTACCGGTGAG 835154 >seq1 Length=3718887 Score = 87.8 bits (96), Expect = 2e-12 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | ||||| || || ||||| || || Sbjct 1834104 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 1834045 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| ||||| || ||||||||||||||| ||| || |||| Sbjct 1834044 GCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 1833985 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAG 127092 | |||| |||| |||||||| |||||| || | ||| | || ||||| || || Sbjct 1833984 ACGTTG-TCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAG 1833929 >seq4 Length=3236612 Score = 82.4 bits (90), Expect = 7e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 126950 GTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATG 127009 |||||| ||| || ||||| || || ||| |||| | |||||||| ||||| || ||| Sbjct 326249 GTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGCGGGATG 326308 Query 127010 CCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTC 127068 |||||||||||| ||| || ||| | |||| |||| ||||||| |||||| || Sbjct 326309 CCCTCCTTGTCCTGGATCTTGGACTTAACGTTG-TCGATCGTGTCCGAGGACTCGACCTC 326367 Query 127069 GACGGTCACCGTTTTGCCGGTCAG 127092 || || | || ||||| || || Sbjct 326368 GAGAGTAATGGTCTTGCCCGTAAG 326391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500110523840