Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq8 111 3e-19 seq2 111 3e-19 >seq8 Length=2605587 Score = 111 bits (122), Expect = 3e-19 Identities = 527/827 (64%), Gaps = 34/827 (4%) Strand=Plus/Minus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 ||| | |||||| ||||||| ||| | |||| | || | ||||||||||| || Sbjct 1314946 CTCGATGATCTCAGTGCACAGGTTGGAGGACTTGATGGTGCCGAGGTGCTGCTGGTTCGA 1314887 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TC 205001 ||||||||| | ||||||||| | |||||| || ||| |||| |||| | || Sbjct 1314886 CTTGCGGTTGGCCGCGTCCTTGTAGAGCATGAAGGGACCGCCGGTCTCAGTCTGGGCCTC 1314827 Query 205002 GCAGAATGTGGGTCCACAATTCGCGAGCCTCCA----CTTGCTTCACGTACATCCCTTGA 205057 ||| || | ||| | | | |||| | ||| | || | ||| | |||| Sbjct 1314826 TAAGA-TGGCGAACCAGAGCTTCTGGGCCTTGATCGTCTTACGTCCCTTACCTGCCTT-- 1314770 Query 205058 GACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGA 205117 |||||| | ||||| ||| | | || || || |||||| || || || Sbjct 1314769 --CTCGTAGCTGGTGTAGAGCTTCTCGAACTCCTCGGAGTGAACGTCCGAGAGACCAGGG 1314712 Query 205118 CATTTTTTGGGACACATCAGAGACCA-----CATCTGA-TCGTCTTTCACCCTCTCCATA 205171 || | ||| ||||| |||| ||| | || || ||| || | || ||| Sbjct 1314711 CACTCAGCGGGGCACATGAGAGTCCAGTCGCCGTCAGACTCG------ACACGCTTCATG 1314658 Query 205172 AACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCA 205231 || || ||| |||||| ||| |||| ||||| ||||| || | | | || | ||| Sbjct 1314657 AAGAGATCGGAGATCCAGAGGGCGTAGAACAGGTCACGAGCACGGACCTCCTCCTTTCCG 1314598 Query 205232 AGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACAC 205290 ||||||| | ||| || ||| || | |||||||||||||| ||||| | | | Sbjct 1314597 TGGTTCTTACGGAGGTCAAGG-AAGTCGAAGATGTCGGCGTGCCAGGGCTCAAGGTAGAT 1314539 Query 205291 GGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAA 205350 ||| | ||||| || | |||||| || |||||||| || || | | |||| | | Sbjct 1314538 GGCAAAGGCGCCGGGGCGCTTGTTGCCTCCCTGGTCAACGTAACGCGCAGTAGCGTCGTA 1314479 Query 205351 AACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCC 205410 | || ||||| || || | |||||| | | ||||| || | |||| |||||| Sbjct 1314478 GGCACGGAGCATGGGAACGATACCGTTCGAGTAACCGTTGGTACCAGCGATGTACGAGCC 1314419 Query 205411 TTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGC 205470 | || | | |||| |||| || || || || | | ||||| |||||| || Sbjct 1314418 CTTCGCGCGAATGTTGTGGATGTGGAGACCGATACCACCGGCAGTCTTGGAGATCTGCGC 1314359 Query 205471 GCA-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGAT 205529 ||| ||||| || ||| |||||| || | || || || ||| || | || || Sbjct 1314358 GCAGGTCTTG-AGGGTGTCGTAGATACCGTCAATCGAGTCATCCTTCATGGCGACGAGGA 1314300 Query 205530 AGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGC 205589 |||| || | || || ||| ||| || | || ||||||||| || |||||| Sbjct 1314299 AGCAAGACGACATCTGGGCGTGAGGGGTACCGGAGTTGAAGAGCGTCGGCGAGGCGTGCG 1314240 Query 205590 TGAAGCGCTTCTCGCTCAAACA----CCTGTAGGTCTCCAGCACGCTCTCCAGATCGAAG 205645 ||||| | |||||| ||| |||||||||| | || |||| | | | Sbjct 1314239 TGAAG----TAGCGCTCAGACATGAGGTTGTAGGTCTCGATTACCTTCTCAATGTTGTCA 1314184 Query 205646 CCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTC 205692 ||||| ||||| | || || | ||||| | ||| || || | ||| Sbjct 1314183 CCGTGGATACCGACGGAGACACGCATGAGCATGTGCTGGGGACGCTC 1314137 Score = 104 bits (114), Expect = 4e-17 Identities = 316/483 (65%), Gaps = 4/483 (1%) Strand=Plus/Minus Query 203849 GTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTTAGG 203908 ||||||||||||||||| ||||||| | | | | ||| ||||| |||||||| || Sbjct 1315899 GTGAACTGAATGGCGTTGGCGGCAGGACGGGTACGCAGGTAGTAGGCACCGGTCTTGAGT 1315840 Query 203909 CCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTT-GCTCACGTTGGGGTCGGCCAT 203967 || || ||| ||||| | |||||| || | || | | ||| ||| | ||| | Sbjct 1315839 CCACGCTTCCAGCCGTAGAAGTGCATCGACGTGAGCTGCGAGAACGAAGGGTT-GGCAAG 1315781 Query 203968 GTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGAT 204027 ||| ||||| || ||||| ||||||||||| | | || || || || | | ||| Sbjct 1315780 GTGGATGTTGAGCGACTGCGACTGGTCGATGAACGCTCCACGGTCCGCAGCGAGGTCGAT 1315721 Query 204028 AATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTGAGGCAC 204087 || | ||||||||| |||||||| || |||||| | | | | || ||| | ||| | Sbjct 1315720 AACCGCCTTCTGCGAGATCTCCCAGACAGTCTTGTAGATGGCCTTGATGTCATCAGGGAT 1315661 Query 204088 ATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTCCTCCC 204146 | | | || || ||| ||||| | || || | || || ||||||| Sbjct 1315660 GT-TGGGGATGTGCTGGATGGAGCCACCGGAAGCGATGATGAGGTTCTTCATCTCCTCGT 1315602 Query 204147 CCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCTC 204206 |||| ||||| | ||||||| || || | || ||| || || ||||| | Sbjct 1315601 CCCAGATGCCAAGGTTGATCAGGTCACGAAGGAGCCACGGGCAGACGACAGCGAAGTCAC 1315542 Query 204207 CGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGTTGC 204266 | ||||| || | || | | | || | ||| | || ||||| |||||| || Sbjct 1315541 CCGACAGGACACGACGAGAGTAGAGCATCGATGTGTAGGGCTCGAAGCACTCGTTCCAGC 1315482 Query 204267 CGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACAC 204326 | | ||||| | ||| || || |||||||| || | ||| || |||||||| || | Sbjct 1315481 CAAGGATCTGCGAAGTGGAAGCAGTAGGCATGGGGGCAACGAGGAGCGAGTTGCGGACGC 1315422 Query 204327 CGT 204329 ||| Sbjct 1315421 CGT 1315419 >seq2 Length=3385878 Score = 111 bits (122), Expect = 3e-19 Identities = 287/432 (66%), Gaps = 4/432 (1%) Strand=Plus/Minus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 || ||| ||||||||| |||||| ||| |||| || || ||||| || | | | || Sbjct 568351 CTTCATGAACAGGTCGGAGATCCAGAGGGCGTAGAAAAGGTCACGCGCACGGACCTCTTC 568292 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283 | || ||||||| | ||| || ||| | | |||||||||||||| ||||| | Sbjct 568291 CTTCCCGTGGTTCTTACGGAGGTCGAGG-AAGTCAAAGATGTCGGCGTGCCAAGGCTCAA 568233 Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343 | | ||| | || || |||| |||||| ||||||||||| || || | | | Sbjct 568232 GGTAGATGGCGAAGGCACCGGGCCGCTTGTTACCACCCTGGTCAACGTAACGGGCAGTAG 568173 Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403 ||| | | | || ||||| || || | |||||| | | |||||||| | |||| Sbjct 568172 CGTCGTAGGCACGAAGCATGGGGACGATACCGTTAGAGTAACCGTTCGTACCAGCGATGT 568113 Query 205404 CCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGA 205463 |||||| | || | | |||| ||| || || ||||| | | ||| | | Sbjct 568112 ACGAGCCCTTCGCACGGATGTTGTGGATATGAAGACCGATGCCGCCGGCAGTCTTTGAAA 568053 Query 205464 TCTGGGCGCA-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522 |||| ||||| ||||| |||||| ||| || || | ||||| |||||| || | Sbjct 568052 TCTGTGCGCAGGTCTTG-AGAGTGTCGTAAATACCGTCAATGGAGTCGTCCTTCATGGCG 567994 Query 205523 ACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTG 205582 || || |||| || | || || ||| |||||||| || ||||||||| || | Sbjct 567993 ACGAGGAAGCAGGACGACATCTGGGCGTGAGGGGTGCCCGAGTTGAAGAGCGTCGGTGAG 567934 Query 205583 GCGTGGCTGAAG 205594 ||||| ||||| Sbjct 567933 GCGTGCGTGAAG 567922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154047024960