Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq10 156 1e-32 seq13 143 6e-29 seq6 132 1e-25 seq3 132 1e-25 seq1 129 1e-24 >seq10 Length=2164251 Score = 156 bits (172), Expect = 1e-32 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| ||||||||||| |||| ||||||||| | | || | || || Sbjct 2138959 AGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 2138900 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||| ||||||||||||||||| ||| ||| || || ||| Sbjct 2138899 TCGAGCTGCTTACCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 2138840 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| |||| ||||| | | || || || | ||||||||| Sbjct 2138839 TGAATCTTCGACTTCACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATCGTC 2138780 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| || ||||| || || || Sbjct 2138779 TTACCCGTGAGGGTCTTCACGAAGATCTG 2138751 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || |||||||||||||| |||| ||||||||| | | || | |||||| Sbjct 2138731 AGGACAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGTCCATCC 2138672 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| |||||||| || ||||||||||| || || || || ||| Sbjct 2138671 TCGAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATCCCCTCCTTGTCC 2138612 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| ||||| | | || || || | ||||| ||| Sbjct 2138611 TGGATCTTCAACTTGACATTGTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATGGTC 2138552 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || || || || Sbjct 2138551 TTGCCAGTCAGAGTCTTGACGAAGATCTG 2138523 Score = 95.1 bits (104), Expect = 3e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| ||||||||||| |||| ||||||||| | | || | || || Sbjct 2139055 AGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 2138996 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTG 199512 || |||||||| || ||||| |||||||||||||| Sbjct 2138995 TCGAGCTGCTTACCAGCGAAAATGAGACGCTGCTG 2138961 Score = 84.2 bits (92), Expect = 5e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 199452 TGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCT 199511 ||||||||| | || | ||||| || |||||||| || || |||||||||||||||| Sbjct 2138414 TGTAGTCAGAAAGGGTACGACCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCT 2138355 Query 199512 GGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTG 199571 |||| || || || || ||||||||||| ||| ||| || | |||||| | Sbjct 2138354 GGTCGGGGGGGATCCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCAG 2138295 Query 199572 TTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTC 199615 | || || || | ||||| ||||| || ||||| || ||| Sbjct 2138294 ACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGCGTCTTC 2138251 >seq13 Length=1285846 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||||||||| || |||||||| |||| ||||||||||| | ||| | ||||| Sbjct 1261221 AGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTACGACCATCC 1261162 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||||||||| || || |||||||||||||| ||| || || ||| Sbjct 1261161 TCGAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 1261102 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| || | ||||| | | || || || | |||||||||| Sbjct 1261101 TGAATCTTGCTCTTGACGTTGTCAATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTC 1261042 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | || || ||||| || || Sbjct 1261041 TTGCCCGTCAACGTCTTGACAAAGATCTG 1261013 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| ||||| |||||||| |||| |||||| |||| | || | |||||| Sbjct 1261449 AGGACGAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGAGAGGGTACGTCCATCC 1261390 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| |||||||| || || |||||||||||||| ||| || || ||| Sbjct 1261389 TCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 1261330 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||| || | | || || |||| || |||||| Sbjct 1261329 TGGATCTTCGACTTGACGTTGTCGATGGTATCCGAGGACTCAACCTCCAGAGTAATCGTC 1261270 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || || || || Sbjct 1261269 TTTCCAGTAAGAGTCTTGACGAAGATCTG 1261241 Score = 132 bits (146), Expect = 1e-25 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| ||||| ||||||||||| |||| ||||||||| | || || | || || Sbjct 1260993 AGAACAAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCC 1260934 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||||||||||||||||||||| ||| || ||||| ||| Sbjct 1260933 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCC 1260874 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 1260873 TGGATCTTCGACTTGACGTTGTCGATGGTGTCGGACGACTCAACCTCAAGGGTGATGGTC 1260814 Query 199598 TTACCCGTGAGAGTTTTC 199615 || || ||||| || ||| Sbjct 1260813 TTGCCGGTGAGGGTCTTC 1260796 >seq6 Length=2834147 Score = 132 bits (146), Expect = 1e-25 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| ||||||||||| |||| ||||||||| | | ||| | || || Sbjct 1117943 AGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCC 1117884 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||||||||||||||| || || || || ||| Sbjct 1117883 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCC 1117824 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | || || ||| Sbjct 1117823 TGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTAATGGTC 1117764 Query 199598 TTACCCGTGAG 199608 ||||| ||||| Sbjct 1117763 TTACCGGTGAG 1117753 >seq3 Length=3240826 Score = 132 bits (146), Expect = 1e-25 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| ||||||||||| |||| ||||||||| | | || | || || Sbjct 834964 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCC 835023 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||||||||||||||| ||| || || || ||| Sbjct 835024 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 835083 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 835084 TGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTGATGGTC 835143 Query 199598 TTACCCGTGAG 199608 ||||| ||||| Sbjct 835144 TTACCGGTGAG 835154 >seq1 Length=3718887 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| ||||||||||| |||| ||||||||| | | || | || || Sbjct 1834119 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 1834060 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||||||||||||||| || || || || ||| Sbjct 1834059 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 1834000 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 1833999 TGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTC 1833940 Query 199598 TTACCCGTGAG 199608 || |||||||| Sbjct 1833939 TTGCCCGTGAG 1833929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178919847827772