Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq10 149 7e-31 seq13 145 9e-30 seq1 123 3e-23 seq6 120 3e-22 seq3 114 1e-20 seq4 111 2e-19 >seq10 Length=2164251 Score = 149 bits (164), Expect = 7e-31 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| | || ||||||||||| || ||||| Sbjct 2138711 CTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGTCCATCCTCGAGCTGCTTTCCAGCGAA 2138652 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||||| || | | |||||||||| ||||||| ||||| | Sbjct 2138651 GATCAGGCGCTGCTGGTCGGGGGGGATCCCCTCCTTGTCCTGGATCTTCAACTTGACATT 2138592 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||||| ||| || || || | |||||||| ||||| ||||| || || || Sbjct 2138591 GTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCAGTCAGAGTCTTGAC 2138532 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 2138531 GAAGATCTGCAT 2138520 Score = 127 bits (140), Expect = 2e-24 Identities = 146/194 (75%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| ||||||||||| || ||||| Sbjct 2138939 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAA 2138880 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || |||||||||| |||||| ||| | ||| Sbjct 2138879 AATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTCA-CGT 2138821 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||||| ||| || || || | ||||| || || ||||| || || || | Sbjct 2138820 TGTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATCGTCTTACCCGTGAGGGTCTTCA 2138761 Query 46581 CAAAGATTTGCATT 46594 | ||||| |||||| Sbjct 2138760 CGAAGATCTGCATT 2138747 Score = 86.0 bits (94), Expect = 7e-12 Identities = 119/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475 ||||||| || || || || | || || ||||||||||| || || || | ||||||| Sbjct 2138414 TGTAGTCAGAAAGGGTACGACCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCT 2138355 Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCG 46534 |||||| || | | |||||||||| |||||| ||||| ||| | | | ||||| Sbjct 2138354 GGTCGGGGGGGATCCCCTCCTTGTCCTGAATCTTCGACTTGA-CGTTGTCAATGGTGTCA 2138296 Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 ||| || || || | |||||||| ||||| || ||||| || Sbjct 2138295 GACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGCGTCTT 2138252 >seq13 Length=1285846 Score = 145 bits (160), Expect = 9e-30 Identities = 150/194 (77%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || ||||| || | || ||||||||||| |||||||| Sbjct 1261201 CTCCTTCTGGATGTTGTAGTCAGAGAGAGTACGACCATCCTCGAGCTGCTTTCCGGCGAA 1261142 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | | |||||||||| ||||| |||||| ||| Sbjct 1261141 AATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGAATCTTGCTCTTGA-CGT 1261083 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | |||||| || |||||||||| ||| || | Sbjct 1261082 TGTCAATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTTGCCCGTCAACGTCTTGA 1261023 Query 46581 CAAAGATTTGCATT 46594 ||||||| |||||| Sbjct 1261022 CAAAGATCTGCATT 1261009 Score = 129 bits (142), Expect = 7e-25 Identities = 137/178 (77%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| |||| |||||||||||||| ||||| Sbjct 1260973 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 1260914 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | || ||||||||| ||||||| ||||| ||| Sbjct 1260913 GATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTCGACTTGA-CGT 1260855 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | | |||||| ||| || || || | |||||||| ||||| || || || || Sbjct 1260854 TGTCGATGGTGTCGGACGACTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTT 1260797 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || || || || | || || ||||||||||||||||| Sbjct 1261429 CTCCTTCTGGATGTTGTAATCAGAGAGGGTACGTCCATCCTCCAGCTGCTTGCCGGCGAA 1261370 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | | |||||||||| ||||||| ||||| ||| Sbjct 1261369 AATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTCGACTTGA-CGT 1261311 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || || || || || |||| || || || || || || || || || | Sbjct 1261310 TGTCGATGGTATCCGAGGACTCAACCTCCAGAGTAATCGTCTTTCCAGTAAGAGTCTTGA 1261251 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 1261250 CGAAGATCTGCAT 1261238 >seq1 Length=3718887 Score = 123 bits (136), Expect = 3e-23 Identities = 132/172 (77%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| |||||||||||||||||||| Sbjct 1834099 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1834040 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | || |||||||||| |||||| ||||| ||| Sbjct 1834039 GATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 1833981 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572 | | | ||||| || || || || | |||||||| |||||||| || Sbjct 1833980 TGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAG 1833929 >seq6 Length=2834147 Score = 120 bits (132), Expect = 3e-22 Identities = 96/116 (83%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| |||||||| |||| |||||||||||||||||||| Sbjct 1117923 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1117864 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517 || | ||||||||||||| || | | |||||||||| ||||||| ||||| Sbjct 1117863 GATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGA 1117808 >seq3 Length=3240826 Score = 114 bits (126), Expect = 1e-20 Identities = 130/172 (76%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| |||| |||||||||||||||||||| Sbjct 834984 CTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 835043 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | |||||||||| ||||||| ||||| ||| Sbjct 835044 GATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGA-CGT 835102 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572 | | | ||||| || || || || | |||||||| || || || || Sbjct 835103 TGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTACCGGTGAG 835154 >seq4 Length=3236612 Score = 111 bits (122), Expect = 2e-19 Identities = 121/158 (77%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475 ||||||| || |||||||| | || |||||||||||||||||||| || | |||||||| Sbjct 326235 TGTAGTCAGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCT 326294 Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCG 46534 |||||| ||| | || |||||||||| |||||| ||| | ||| | | | |||||| Sbjct 326295 GGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTT-AACGTTGTCGATCGTGTCC 326353 Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572 || || || || | || ||||| |||||||| || Sbjct 326354 GAGGACTCGACCTCGAGAGTAATGGTCTTGCCCGTAAG 326391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237580404320