Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2 304 1e-77 seq16 302 4e-77 seq10 129 6e-25 seq1 127 2e-24 seq13 123 2e-23 seq6 113 5e-20 seq3 113 5e-20 >seq2 Length=3385878 Score = 304 bits (336), Expect = 1e-77 Identities = 542/782 (69%), Gaps = 13/782 (2%) Strand=Plus/Minus Query 132666 CATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAG 132725 ||| || || ||||||||||| | ||| || |||| | | ||| ||||||| || Sbjct 2877121 CATGAAGTCGAAGGGGTTGGCCGAGTTCCAGATCTTGTCGTTGCCAAGGGCGACGAGGAG 2877062 Query 132726 CCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGAC 132784 | |||||| |||||||||||||| || ||||| | || || | | | || | || Sbjct 2877061 ACGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATG-CCGATGAGCG 2877003 Query 132785 GCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTT 132844 |||||| || || |||||||| || ||||| || ||| || || ||| ||| | Sbjct 2877002 ACACCGGGAGGGCCTCGGTGAGGAACTCCTGCTCAATCTTGACGGCCTCCTTGATGATCT 2876943 Query 132845 CCCTAACGCGCG-CCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAG 132903 | | || | ||| | || || | | || |||| | || ||| || ||| Sbjct 2876942 TGTTGAT-CGTGTCCGGGTGGGGACGGCGGCGGAGGTGGGTGAAGAGCAGGCAGGCGAAG 2876884 Query 132904 TCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATG 132963 ||| || | |||||||| | || ||||| |||||| ||| || | |||||||||| Sbjct 2876883 TCGGTGTGGAGACCCTCGTCGCGCGAGATGAGCTCGTTGGAGAACGTGAGGCCGGGCATG 2876824 Query 132964 AGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCG 133023 |||||||| || || ||||| || |||| ||||| ||| || ||||||| ||||| Sbjct 2876823 AGGCCGCGCTTCTTCAGCCAGAAGATGGACGCGAACGAGCCTGAGAAGAAGATACCCTCA 2876764 Query 133024 ACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGC 133083 ||||| ||||| || | |||||||||||||||| || || | || ||||| ||| Sbjct 2876763 ACGGCAGCGAACGCGATGAGGCGCTCGCCGAACGAGGAGCGTTGGTCGGAAATCCACCGC 2876704 Query 133084 AGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACA--AAC 133141 || ||||| |||||||| | |||| ||| || || || |||||||| | |||| ||| Sbjct 2876703 AGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGCCTGGAACAGGAAC 2876644 Query 133142 -GGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAG 133200 || | | | | | || | ||| |||||||||||| ||| ||| | ||||| Sbjct 2876643 TGGCGGCGCGCGT---TGTCGCGGATGTACGTGTCGATGAGGAGCGAGTACGTCTCCGAA 2876587 Query 133201 TGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACT 133260 || | ||||||||| ||| || || ||||| || | |||||| | ||| || Sbjct 2876586 TGGATGTTCTCCATCATGATCTGGAAACCGTAGAACGTCTTGGCCTCGGAGATCTGGACC 2876527 Query 133261 TCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAG 133320 || ||| ||||| || || ||||||||||||||||| || |||||||| || Sbjct 2876526 TCGCCGCAGAAGCGCTCCACGAGGTTTTCGTTGACGATGCCATCCGACGCGGCGAAGAAC 2876467 Query 133321 GCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAGTCGCGC 133377 || || ||||||| |||||| |||||| |||||||||| | ||||||||| | Sbjct 2876466 GCGAGGACGTGCTCGATGAAGAAGCGCTCATTGTCGTTCAGCTTGTTGTCCCAGTCGTGG 2876407 Query 133378 GTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTAC 133437 ||| || |||| | ||||||| ||||||| ||||| |||| || || |||||| Sbjct 2876406 AGGTCGGGGGCGAGGTTGATCTCCTCGGCGGTCCAGAACGAAGCCTGAGCCTTCTTGTAC 2876347 Query 133438 AT 133439 || Sbjct 2876346 AT 2876345 >seq16 Length=836766 Score = 302 bits (334), Expect = 4e-77 Identities = 544/785 (69%), Gaps = 19/785 (2%) Strand=Plus/Minus Query 132666 CATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAG 132722 ||| || || |||||||||| | ||| || ||||| |||||| || ||||||| Sbjct 122816 CATGAAGTCGAAGGGGTTGGACGAGTTCCAGAGCTTGTCGTTGCCGA---GGGCGACGAG 122760 Query 132723 CAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCA 132781 || | |||||| |||||||| ||||| || ||||| | || || | | | || | | Sbjct 122759 GAGGCGGTCGGCGACGAACTCAATGTACTGGCACATGAGCTTGGCGTTCATG-CCGATGA 122701 Query 132782 GACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGA 132841 | || || || || ||||| || || |||||||| |||||| || ||| || Sbjct 122700 GCGAGACGGGGAGGGCCTCGGTCAGGAACTCCTGCTCGATCTTGACCGCCTCCTTGATGA 122641 Query 132842 TTTCCCTAACGCGCG-CCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCA 132900 | | | | || | ||| | |||||| | | ||| |||| | || ||| || Sbjct 122640 TCTTGTTGAT-CGTGTCCGGGTGCGGCCGGCGGCGGAGGTGCGTGAAGAGCAGGCAGGCG 122582 Query 132901 AAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGC 132960 |||||| |||| |||||||| | || ||||| ||||| ||| || | ||||||| Sbjct 122581 AAGTCGGTGTGCAGACCCTCGTCGCGCGAGATGAGCTCGTTCGAGAACGTGAGGCCGGGC 122522 Query 132961 ATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCC 133020 ||||| ||||| || || ||||| || |||| |||||| ||| || ||||||| ||| Sbjct 122521 ATGAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAACGAGCCAGAGAAGAAGATACCC 122462 Query 133021 TCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAG 133080 |||||||| ||||| || | |||||||||||||||| | ||| | ||||||| Sbjct 122461 TCGACGGCGGCGAAGGCGATGAGGCGCTCGCCGAACGACGACCGCTTGTCCGAGATCCAG 122402 Query 133081 CGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACA-- 133138 || |||||||| |||||||| | |||| ||| || ||||| ||||| || | |||| Sbjct 122401 CGAAGCGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTGTCGATAGCCTGGAACAGG 122342 Query 133139 AACGGA-GTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCC 133197 || || | | | | | || | ||| |||||||| ||| ||| ||| | ||| Sbjct 122341 TACTGACGGCGCGCGT---TGTCGCGGATGTACGTGTCGATCAGGAGCGAGTACGTCTCC 122285 Query 133198 GAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGC 133257 ||||| | ||||||||| ||| || || ||||| || | ||||| | ||| Sbjct 122284 GAGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAACGTCTTGGCCTCAGAGATCTGG 122225 Query 133258 ACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAA 133317 || ||| ||| |||||||| || || |||||||| |||||||| |||||||| Sbjct 122224 ACCTCTCCGCAGAAGCGCTCGACGAGGTTCTCGTTGACTATGCCGTCCGACGCGGCGAAG 122165 Query 133318 AAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAGTCG 133374 || || || ||||||| |||||| ||||||||||||||||| | ||||||||| Sbjct 122164 AAAGCAAGGACGTGCTCGATGAAGAAGCGCTCGTTGTCGTTCAGCTTGTTGTCCCAGTCG 122105 Query 133375 CGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTG 133434 | ||| | |||| | |||||| | ||||| ||||| |||| || || ||| Sbjct 122104 TGGAGGTCGGGCGCGAGGTTGATCTCCTCAGCAGTCCAGAACGAAGCCTGAGCCTTCTTG 122045 Query 133435 TACAT 133439 ||||| Sbjct 122044 TACAT 122040 >seq10 Length=2164251 Score = 129 bits (142), Expect = 6e-25 Identities = 153/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || |||||||| || || ||||| |||| |||||| | | Sbjct 2138747 AATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACGATCACTCTCGAGGTCGAGTCGTC 2138806 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 ||||| | | |||| | || || || | ||||| ||||| ||||| | |||| Sbjct 2138807 CGACACGATCGACAACG-TGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCTGACC 2138865 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||||| ||| || || ||||| || |||| ||||||||| ||||||| Sbjct 2138866 AGCAGCGTCTCATTTTCGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACA 2138925 Query 38422 ACATCCAAAAGGAAGCGACGCTGCA 38446 ||||||| ||||| ||||||| || Sbjct 2138926 ACATCCAGAAGGAGTCGACGCTCCA 2138950 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| |||||||| |||| |||||| | || Sbjct 2138520 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATCACTCTCGAGGTCGAGTCGTCC 2138579 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || |||| ||||| ||||| || ||| ||||||| Sbjct 2138580 GACACGATCGACAATGTCAAGTTGAAGATCCAGGACAAGGAGGGGATCCCCCCCGACCAG 2138639 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || ||||| || || | ||||| ||| |||||||||| Sbjct 2138640 CAGCGCCTGATCTTCGCTGGAAAGCAGCTCGAGGATGGACGCACGCTCTCCGACTACAAC 2138699 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| |||| || ||| | || || ||| Sbjct 2138700 ATCCAGAAGGAGTCGACTCTTCATCTTGTCCTCCGT 2138735 >seq1 Length=3718887 Score = 127 bits (140), Expect = 2e-24 Identities = 154/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAA 38323 ||||||||||| ||||||||| | || |||||| || | |||| | | | |||| | || Sbjct 1833929 CTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATCGACAACG-TCAA 1833987 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || |||| ||||| ||||| || ||| ||||||| ||||| ||||| | ||| || Sbjct 1833988 GTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGG 1834047 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || |||| |||||||| |||||||||||||| ||||| |||| || Sbjct 1834048 CAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCT 1834107 Query 38444 GCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || | || || ||| || | || || Sbjct 1834108 CCACCTCGTCCTCCGTCTGCGTGGTGG 1834134 >seq13 Length=1285846 Score = 123 bits (136), Expect = 2e-23 Identities = 150/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 38259 AAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AAC 38317 || || ||||| ||||| ||||||||| | || || ||| | |||||| | | | ||| Sbjct 1260797 AAGACCCTCACCGGCAAGACCATCACCCTTGAGGTTGAGTCGTCCGACACCATCGACAAC 1260856 Query 38318 GCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTA 38377 | | || || |||| ||||| || || || || ||||||| ||||| ||||| | Sbjct 1260857 G-TCAAGTCGAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAGCAGCGTCTCATCTT 1260915 Query 38378 CGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGC 38437 ||| ||||| ||||| || |||| |||||||| ||||||||||||||| ||||| | Sbjct 1260916 CGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTC 1260975 Query 38438 GACGCTGCATTTGGTGCTGCGT 38459 |||||| ||| | || || ||| Sbjct 1260976 GACGCTCCATCTTGTTCTTCGT 1260997 Score = 102 bits (112), Expect = 8e-17 Identities = 141/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || || ||| | |||||||| || ||||| | || || ||| || | Sbjct 1261009 AATGCAGATCTTTGTCAAGACGTTGACGGGCAAGACGATCACGCTTGAGGTTGAGTCCTC 1261068 Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||| | || |||| | |||| || || | ||||| ||||| |||||| | ||| Sbjct 1261069 GGACACGATTGACAACG--TCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCGGAC 1261126 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || |||| ||| || || ||||| || || | || || ||| |||||| Sbjct 1261127 CAGCAGCGCCTGATTTTCGCCGGAAAGCAGCTCGAGGATGGTCGTACTCTCTCTGACTAC 1261186 Query 38421 AACATCCAAAAGGA 38434 |||||||| ||||| Sbjct 1261187 AACATCCAGAAGGA 1261200 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || || || || | || || ||| || | Sbjct 1261238 ATGCAGATCTTCGTCAAGACTCTTACTGGAAAGACGATTACTCTGGAGGTTGAGTCCTCG 1261297 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || || |||| ||||| ||||| |||||| | ||||| Sbjct 1261298 GATACCATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCA 1261356 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || |||| ||| ||||| |||||||| || | || |||||| || ||||| Sbjct 1261357 GCAGCGCCTGATTTTCGCCGGCAAGCAGCTGGAGGATGGACGTACCCTCTCTGATTACAA 1261416 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | || ||||| | || || ||| || | || || Sbjct 1261417 CATCCAGAAGGAGTCCACTCTGCACCTCGTCCTTCGTCTGCGTGGAGG 1261464 >seq6 Length=2834147 Score = 113 bits (124), Expect = 5e-20 Identities = 144/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAA 38323 ||||| || || ||||| || |||| |||||| || | |||| | | | |||| | || Sbjct 1117753 CTCACCGGTAAGACCATTACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACG-TCAA 1117811 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || |||| ||||| ||||| || ||| ||||||| ||||| ||||| | ||| || Sbjct 1117812 GTCGAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGG 1117871 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || |||| ||||| || ||||||||||||||| ||||| |||| || Sbjct 1117872 CAAGCAGCTCGAGGACGGCCGCACTCTTTCCGACTACAACATCCAGAAGGAGTCGACCCT 1117931 Query 38444 GCATTTGGTGCTGCGT 38459 || | || || ||| Sbjct 1117932 CCACCTTGTCCTCCGT 1117947 >seq3 Length=3240826 Score = 113 bits (124), Expect = 5e-20 Identities = 144/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAA 38323 ||||| || || |||||||| |||| |||||| || | |||| | | | |||| | || Sbjct 835154 CTCACCGGTAAGACCATCACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACG-TCAA 835096 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || |||| ||||| ||||| || || | ||||| ||||| ||||| | ||| || Sbjct 835095 GTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTCATCTTCGCCGG 835036 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || |||| |||||||| ||||||||||||||| ||||| |||| || Sbjct 835035 CAAGCAGCTCGAGGACGGCCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCGACCCT 834976 Query 38444 GCATTTGGTGCTGCGT 38459 || | || || ||| Sbjct 834975 CCACCTCGTCCTCCGT 834960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172074749440