Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq8 161 1e-34 seq2 120 4e-22 seq16 114 2e-20 seq5 86.0 8e-12 >seq8 Length=2605587 Score = 161 bits (178), Expect = 1e-34 Identities = 673/1046 (64%), Gaps = 27/1046 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| ||| | |||||||||| || || | ||||| || Sbjct 1314143 CCCCAGCACATGCTCATGCGTGTCTCCGTCGGTATCCACGGTGACAACATTGAGAAGGTA 1314202 Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||| || ||||| | | || |||| ||||| | || || ||||| Sbjct 1314203 ATCGAGACCTACAACCTCATGTCTGAGCGCTAC-TTCACGCACGCCTCGCCGACGCTCTT 1314261 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||| | ||||| || |||| ||||| ||| ||||| | || | ||||| || Sbjct 1314262 CAACTCCGGTACCCCTCACGCCCAGATGTCGTCTTGCTTCCTCGTCGCCATGAAGGATGA 1314321 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || || | || || |||| ||| |||| || || || ||||| ||| || || Sbjct 1314322 CTCGATTGACGGTATCTACGACACCCTCAAGACCTGCGCGCAGATCTCCAAGACTGCCGG 1314381 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTACA 111908 ||||||||| | |||||||| | | | || || | |||||| | | ||||| Sbjct 1314382 TGGTATCGGTCTCCACATCCACAACATTCGCGCGAAG--GGCTCGTACATCGCTGGTACC 1314439 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || ||| | || | ||||| |||| ||||| || | | |||| || ||||| || Sbjct 1314440 AACGGTTACTCGAACGGTATCGTTCCCATGCTCCGTGCCTACGACGCTACTGCGCGTTAC 1314499 Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022 || |||| | || ||| | | || | | || |||| |||||||| ||| Sbjct 1314500 GTTGACCAGGGAGGCAACAAGCGCCCC---GGCGCCTTTGCCATCTACCTTGAGCCCTGG 1314556 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082 ||||| || ||| | || |||||||| | ||| ||||| || | ||||||| || Sbjct 1314557 CACGCCGACATCTTCGACTTCCTTGACCTCCGTAAGAACCACGGAAAGGAGGAGGTCCG- 1314615 Query 112083 TGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141 ||| || || || |||| ||| |||||||| | ||||||||||||||| | || ||| Sbjct 1314616 TGCTCGTGACCTGTTCTACGCCCTCTGGATCTCCGATCTCTTCATGAAGCGTGTCGAGTC 1314675 Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 ||| | ||| ||||| | || || | || || |||||||| || | Sbjct 1314676 TGACGGCGACTGGACTCTCATGTGCCCCGCTGAGTGCCCTGGTCTCTCGGACGTTCACTC 1314735 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGAC-TGCGACGG 112260 |||||||| || |||||||| | |||||| | | | || || ||| | |||| Sbjct 1314736 CGAGGAGTTCGAGAAGCTCTACACCAGCTACGAGAAGGCAGGTAAGG-GACGTAAGACGA 1314794 Query 112261 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319 | | || | || | | ||| || || | || | || || ||||| || || Sbjct 1314795 T-CAAGGCCCAGAAGCTCTGGTTCGCCATCTTAGAGGCCCAGACTGAGACCGGCGGTCCC 1314853 Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379 | ||||| ||||| ||||| |||| ||| || || || | | || ||| Sbjct 1314854 TTCATGCTCTACAAGGACGCGGCCAACCGCAAGTCGAACCAGCAGCACCTCGGCACCATC 1314913 Query 112380 AAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 112439 ||| |||||||| || || || ||| | || | | |||||| || || Sbjct 1314914 AAGTCCTCCAACCTGTGCACTGAGATCATCGAGTACTCCTCTCCTGATGAGGTTGCCGTC 1314973 Query 112440 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGAT 112499 || ||||| || || ||||||||||| | || || |||| ||||| | | Sbjct 1314974 TGCAACCTTGCCTCGATCGCTCTCCCTGCCTTCGTCGACTTCGAGAACAAGACCTACAAC 1315033 Query 112500 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGAT 112559 | | || || ||||| | || || ||||| || ||||| || || || Sbjct 1315034 TTCAAGAAGCTTCACGAGATCACCAAGGTCGTCACCAAGAACCTTGACCAGGTCATCACC 1315093 Query 112560 AGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 112616 | || | |||||||| |||| ||||| || || || ||| | ||||| || | Sbjct 1315094 CGCAACTACTACCCCGTCCCTGAG---GCTCGCAACTCGAACATGCGTCACCGCCCCGTC 1315150 Query 112617 GGTCTCGGTGTCCAAGGTCTCGCGGA 112642 |||||||||||||| ||||| || || Sbjct 1315151 GGTCTCGGTGTCCAGGGTCTTGCCGA 1315176 >seq2 Length=3385878 Score = 120 bits (132), Expect = 4e-22 Identities = 164/224 (73%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 102099 GCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGG-TTTGA 102157 |||||| | || | || || || | ||||| || || ||||| || |||| ||| Sbjct 2876657 GCCATCGACACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCCCTGCGGTGGATTTCC 2876716 Query 102158 TACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTT 102217 || || | | | | || | ||||| ||| |||| || || |||||||||||||| Sbjct 2876717 GACCAACGCTCCT-CGTTCGGCGAGCGCCTCATCGCGTTCGCTGCCGTTGAGGGTATCTT 2876775 Query 102218 CTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 102276 |||||| || || ||| ||| | || | ||||| |||||||| || |||||||| || | Sbjct 2876776 CTTCTCAGGCTCGTTC-GCGTCCATCTTCTGGCTGAAGAAGCGCGGCCTCATGCCCGGCC 2876834 Query 102277 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 || |||||||||||||| ||||| || |||||||| |||||| Sbjct 2876835 TCACGTTCTCCAACGAGCTCATCTCGCGCGACGAGGGTCTCCAC 2876878 >seq16 Length=836766 Score = 114 bits (126), Expect = 2e-20 Identities = 110/141 (78%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 102180 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 102239 ||||| ||| |||| || || || |||||||||||||||||||| || ||| | | Sbjct 122433 GAGCGCCTCATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCGTTCGCCTCC 122492 Query 102240 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 102299 || | ||||| |||||||| ||||||||||| || ||| ||||| |||||||| ||| Sbjct 122493 ATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGCCTCACGTTCTCGAACGAGCTCATC 122552 Query 102300 TCTCGTGACGAGGGACTCCAC 102320 || || |||||||| || ||| Sbjct 122553 TCGCGCGACGAGGGTCTGCAC 122573 Score = 105 bits (116), Expect = 8e-18 Identities = 150/208 (72%), Gaps = 5/208 (2%) Strand=Plus/Minus Query 102114 CCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCC 102173 || || || || ||||| || || ||||| ||||||| || || | | || || Sbjct 440158 CCCTGCATCCAGAAGAAGGCAGACTGGGCAATGAAGTACATT---ACCA-GCGATGTCCC 440103 Query 102174 TTTGCTGAG-CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 102232 ||| | || || || | || ||||| ||||| ||||| || |||||||| || || || Sbjct 440102 TTTCCGGATACGCCTGATTGCGTTTGCTTGTGTGGAGGGCATTTTCTTCTCCGGATCATT 440043 Query 102233 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 102292 | ||| || | ||||| |||||||| || ||||||| ||| ||| ||||||||||| Sbjct 440042 CGCCGCAATCTTCTGGCTGAAGAAGCGCGGGCTCATGCAAGGGCTCACATTCTCCAACGA 439983 Query 102293 GCTTATCTCTCGTGACGAGGGACTCCAC 102320 ||| ||| ||| || ||||| || ||| Sbjct 439982 GCTCATCAGTCGCGATGAGGGCCTGCAC 439955 >seq5 Length=2913187 Score = 86.0 bits (94), Expect = 8e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16059 CCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCA 16118 |||| |||||| | ||| || ||||| | |||| || || | ||| ||| | | Sbjct 2687308 CCCATGGCATCCAACTCGTCGATGAAAATGATGGCGGGAGCCTTCTTGCGCGCGGCGGCG 2687367 Query 16119 AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 16178 ||||| || || ||||||||||| || ||||| || |||||||| | || | | || Sbjct 2687368 AAGAGGTCGCGGACACGCTTGGCACCGACACCGACGAACATCTCGTCGAACGACGAGCCG 2687427 Query 16179 GAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTA 16238 ||| | |||||| || | | ||||| || | |||||| ||||| | |||||| Sbjct 2687428 GAAGCGAACAGGAAGGGAACCTCCGCCTCACCGGCGACGGCTCGCGCGAGCATCGTCTTA 2687487 Query 16239 CCCGTACCTGGCTTACCCGCGAGGAGGGCACC 16270 || ||||| || ||| | |||||| |||| Sbjct 2687488 CCAGTACCCGGAGGACCGGTCAGGAGGACACC 2687519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741499923520