Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2 134 2e-26 seq16 114 2e-20 seq3 93.3 5e-14 >seq2 Length=3385878 Score = 134 bits (148), Expect = 2e-26 Identities = 283/414 (68%), Gaps = 6/414 (1%) Strand=Plus/Minus Query 117096 GAGGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGAT 117155 ||||||||| || | || |||| ||||||| | |||| || | |||||| ||||| Sbjct 2877067 GAGGAGACGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAT 2877008 Query 117156 GAGATTACAT-GGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCA 117214 ||| ||| ||||| || || || |||| | | |||||||| || ||||| || | Sbjct 2877007 GAGCG-ACACCGGGAGGGCCTCGGTGAGGAACTCCTGCTCAATCTTGACGGCCTCCTTGA 2876949 Query 117215 CGATGGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGG 117274 ||| || ||| || || | ||| | || | |||||||| || Sbjct 2876948 TGATCTTGTTGATCGTGTCCGGGTGGGGACGGCGGCGGAGGTGGGTGAAGAGCAGGCAGG 2876889 Query 117275 CAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTG 117334 | || || |||||||||||| || || || || || || || ||||| ||||| | Sbjct 2876888 CGAAGTCGGTGTGGAGACCCTCGTCGCGCGAGATGAGCTCGTTGGAGAACGTGAGGCCGG 2876829 Query 117335 GCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATA 117393 ||||||| || |||||||||| ||| | || | ||| ||| || || |||||||||||| Sbjct 2876828 GCATGAGGCCGCGCTTCTTCAGCCAGAAGATGGACGC-GAACGAGCCTGAGAAGAAGATA 2876770 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAA 117452 ||||| || || ||||| | ||||||||| |||| ||| ||| || || | || Sbjct 2876769 CCCTCAACGGCAGCGAACGCGATGAGGCGCTCGCCGAACGAG-GAGCGTTGGTCGGAAAT 2876711 Query 117453 CCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506 ||| || ||||| | |||||||||| || || || | || | |||||| Sbjct 2876710 CCACCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGC 2876657 Score = 122 bits (134), Expect = 1e-22 Identities = 350/529 (66%), Gaps = 17/529 (3%) Strand=Plus/Minus Query 106783 CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACC 106841 ||| || ||||||||||| ||||| | ||||| |||| | || || || | ||| Sbjct 568360 CTCGACACGCTTCATGAACAGGTCGGAGATCCAGAGGGCGTAGAAAAGGTCACGCGCACG 568301 Query 106842 GAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCC 106901 || ||||||| | || ||||| || | || ||||| || | ||| || ||||||| Sbjct 568300 GA-CCTCTTCCTTCCCGTGGTTCTTACGGAGGTCGAGGAAGTCAAAGATGTCGGCGTGCC 568242 Query 106902 ATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACAT 106955 | |||||||| |||| |||| | || | ||| ||| | || | || | Sbjct 568241 AAGGCTCAAGGTAGATGGCGAAGGCACCGG---GCCGCTTGTTACCACCCTGGTCAACGT 568185 Query 106956 AGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG 107015 | || || || |||| | | |||||||| || | ||||| | || | ||| || | Sbjct 568184 AACGGGCAGTAGCGTCGTAGGCACGAAGCATGGGGACGATACCGTTAGAGTAACCGTTCG 568125 Query 107016 TCCCC-CGAA-TACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCC 107073 | || ||| |||||| | | || | | | ||||| || | || || || || Sbjct 568124 TACCAGCGATGTACGAGCCCT--TCGCACGGATGTTGTGGATATGAAGACCGATGCCGCC 568067 Query 107074 AGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTC 107133 || |||||| || || || || | | ||||| | || ||||||| || ||||| Sbjct 568066 GGCAGTCTTTGAAATCTGTGCGCAGGTCTTGAGAGTGTCGTAAATACCGTCAATGGAGTC 568007 Query 107134 CTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAA 107193 ||||| |||||| |||||||| |||||||| | || || || | ||||| Sbjct 568006 GTCCTTCATGGCGACGAGGAAGCAGGACGACATCTGGGCGTGAGGGGTGCCCGAGTTGAA 567947 Query 107194 GAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGA 107252 ||| || |||| ||||| |||| |||| | |||||| || ||| ||||| | || Sbjct 567946 GAGCGTCGGTGAGGCGTGCGTGAAG-TACCGCTCGGACATAAGGTTGTACGTCTCGATGA 567888 Query 107253 CAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACAT 107301 | ||||||| || ||||||||||| | || |||||||| | ||| Sbjct 567887 CCTTCTCAATGTTGTCGCCGTGGATGCCAACGGAAACACGCATCAGCAT 567839 Score = 120 bits (132), Expect = 4e-22 Identities = 114/143 (80%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| ||| ||| |||||||| ||||| || || ||||| |||||| |||||| Sbjct 3154652 GCAAAGTCCGTGTGCAGACCCTCGTCTCGACTGATGAGCTCATTCGAGAAGGTCAGGCCT 3154711 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 117392 |||||||||| |||||||||| ||| | || || ||| || ||||| ||||| ||||| Sbjct 3154712 TGCATGAGACCACGCTTCTTCAGCCAGAAGATCGCCGCA-AACGACCCCGAGAAAAAGAT 3154770 Query 117393 ACCCTCCACACACGCAAACGCAA 117415 ||||||||||| |||||||||| Sbjct 3154771 GCCCTCCACACAGGCAAACGCAA 3154793 >seq16 Length=836766 Score = 114 bits (126), Expect = 2e-20 Identities = 231/340 (68%), Gaps = 2/340 (1%) Strand=Plus/Minus Query 117096 GAGGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGAT 117155 |||||| || || | || |||||||||||| | |||| || | |||||| ||||| Sbjct 122762 GAGGAGGCGGTCGGCGACGAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAT 122703 Query 117156 GAGATTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCAC 117215 ||| ||||| || || | |||| | | ||| |||| |||||||| || | Sbjct 122702 GAGCGAGACGGGGAGGGCCTCGGTCAGGAACTCCTGCTCGATCTTGACCGCCTCCTTGAT 122643 Query 117216 GATGGCGTGGATAGTTTCGGTAGTG-GGTCTATTACGCAAAGTCTTGAAGAGCTCCACGG 117274 ||| || ||| || || | ||| || | || | | |||||||| || Sbjct 122642 GATCTTGTTGATCGTGTCCGG-GTGCGGCCGGCGGCGGAGGTGCGTGAAGAGCAGGCAGG 122584 Query 117275 CAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTG 117334 | || || ||| |||||||| || || || || || || || ||||| ||||| | Sbjct 122583 CGAAGTCGGTGTGCAGACCCTCGTCGCGCGAGATGAGCTCGTTCGAGAACGTGAGGCCGG 122524 Query 117335 GCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATAC 117394 |||||||||| |||||||||| ||| | || | | ||| || || ||||||||||||| Sbjct 122523 GCATGAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAACGAGCCAGAGAAGAAGATAC 122464 Query 117395 CCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434 |||| || || || || | ||||||||| |||| || Sbjct 122463 CCTCGACGGCGGCGAAGGCGATGAGGCGCTCGCCGAACGA 122424 Score = 111 bits (122), Expect = 2e-19 Identities = 152/210 (72%), Gaps = 7/210 (3%) Strand=Plus/Plus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 || || ||| ||| || |||||||| || || || || || ||||| || ||| Sbjct 439944 GCGAAATCCGTGTGCAGGCCCTCATCGCGACTGATGAGCTCGTTGGAGAATGTGAGCCCT 440003 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||||| || |||||||||| ||| | || ||| |||||| ||||||||||| || Sbjct 440004 TGCATGAGCCCGCGCTTCTTCAGCCAGAAGATTGCGGCGAATGATCCGGAGAAGAAAATG 440063 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCG-CTCGGCGAAGGAGCGAGACTTTG-TGTCAA 117451 ||||||||||| |||||||||| ||||| || | |||| ||| | | || || Sbjct 440064 CCCTCCACACAAGCAAACGCAATCAGGCGTATCCGGAAAGG-----GACATCGCTGGTAA 440118 Query 117452 ACCATTTCATTGCCCATTTCGCCTTCTTCT 117481 | ||||||||||| | |||||||||| Sbjct 440119 TGTACTTCATTGCCCAGTCTGCCTTCTTCT 440148 >seq3 Length=3240826 Score = 93.3 bits (102), Expect = 5e-14 Identities = 169/245 (69%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 168289 ATCCCGTACCGATACCTTCGGTTCCATTCACGAGAACCATTGGTATGGTTGGCATGTAAA 168348 |||| || |||||||| || | ||| || | ||| ||||| || | | |||||||| | Sbjct 2992425 ATCCAGTGCCGATACCGTCCGCTCCGTTGATGAGGACCATGGGAACGACAGGCATGTAGA 2992366 Query 168349 AGTCTGGTTCAATTGAGCGCCCATCATCATCCAAGTAGTTGAGGATCGGGTCATCCCGAG 168408 | || ||||| || | || || || | || |||||| |||| ||||| | Sbjct 2992365 ACTCGGGTTCGATATGCTGTCCCTCCTCGAAGAGGTTGTTGAGAATCGCATCATCGGCGG 2992306 Query 168409 GATCAAAGATCTTGCGAGCCTCTTTGGTAAGTTTTGTGAAAATGTACCTCGT-CTGAGAA 168467 ||| ||||| |||| | || | | | ||||||||||| | | ||| | | Sbjct 2992305 GATGGAAGATGGTGCGCGTGACTCGAGGTACACTCGTGAAAATGTAACGAGCACTG-GCA 2992247 Query 168468 GCATCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAATG 168527 ||||||||||||||| |||||||||||| |||||||| ||| | || ||||| | | Sbjct 2992246 GCATCCTTACCACCCTGGAGACGCGTACCGAATTGACCGTTGGGTGCGAGCAGGTTGAGG 2992187 Query 168528 TTGTT 168532 ||||| Sbjct 2992186 TTGTT 2992182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979944527840