Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq13 150 4e-31 seq10 127 5e-24 seq6 127 5e-24 seq1 122 2e-22 seq3 118 2e-21 seq4 102 2e-16 >seq13 Length=1285846 Score = 150 bits (166), Expect = 4e-31 Identities = 160/211 (76%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||||||||| || |||||||| || || || ||||| || | ||||| | ||||| || Sbjct 1261219 AACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTACGACCATCCTC 1261160 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || ||||| || || || || ||||| || ||||| || || ||||| || Sbjct 1261159 GAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTG 1261100 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||||||||| ||||| |||||||| || || ||||| || | |||||| Sbjct 1261099 AATCTTGCTCTTGACGTTGTCAATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTT 1261040 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || ||||| || || || || | |||||| Sbjct 1261039 GCCCGTCAACGTCTTGACAAAGATCTGCATT 1261009 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||||||||| || || || |||||||| | || || | ||||| || Sbjct 1261446 ACGAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGAGAGGGTACGTCCATCCTCC 1261387 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||| || || || || ||||| || ||||| || || ||||| || Sbjct 1261386 AGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGG 1261327 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || ||||| ||||| || || || || |||| ||||||| Sbjct 1261326 ATCTTCGACTTGACGTTGTCGATGGTATCCGAGGACTCAACCTCCAGAGTAATCGTCTTT 1261267 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || ||||| | ||||| Sbjct 1261266 CCAGTAAGAGTCTTGACGAAGATCTGCAT 1261238 Score = 129 bits (142), Expect = 1e-24 Identities = 140/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||| || || || ||||| || || || ||||| |||| || || | || || || Sbjct 1260991 AACAAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTC 1260932 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || |||||||| || || || ||||| ||||| |||||||| ||||| || Sbjct 1260931 GAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTG 1260872 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||||||||| || |||||||| || || || |||||||| | ||||| Sbjct 1260871 GATCTTCGACTTGACGTTGTCGATGGTGTCGGACGACTCAACCTCAAGGGTGATGGTCTT 1260812 Query 195111 TCCTGT 195116 || || Sbjct 1260811 GCCGGT 1260806 >seq10 Length=2164251 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || || ||||| || || || ||||| || | || || | || || ||| Sbjct 2138956 ACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCG 2138897 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| ||||| || || || || ||||| ||||||||||| || ||||| ||| Sbjct 2138896 AGCTGCTTACCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGA 2138837 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || || ||||| || || || || || || | |||||| Sbjct 2138836 ATCTTCGACTTCACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATCGTCTTA 2138777 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || | || || ||||| | |||||| Sbjct 2138776 CCCGTGAGGGTCTTCACGAAGATCTGCATT 2138747 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| |||||||| ||||| || || || ||||| |||| || || | ||||| ||| Sbjct 2138728 ACAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGTCCATCCTCG 2138669 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || || || || || ||||| || Sbjct 2138668 AGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATCCCCTCCTTGTCCTGG 2138609 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || || ||||| || || || || || || | ||||| Sbjct 2138608 ATCTTCAACTTGACATTGTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTG 2138549 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| ||| || ||||| | ||||| Sbjct 2138548 CCAGTCAGAGTCTTGACGAAGATCTGCAT 2138520 Score = 93.3 bits (102), Expect = 9e-14 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 194963 TGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTT 195022 |||| || | ||| || | ||||| || |||||||| || || ||||| || || || | Sbjct 2138414 TGTAGTCAGAAAGGGTACGACCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCT 2138355 Query 195023 GGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCG 195082 |||| || || || || || ||||| ||||| || ||||||||| ||||||||||| | Sbjct 2138354 GGTCGGGGGGGATCCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCAG 2138295 Query 195083 AACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | || || || ||||| | ||||| || || Sbjct 2138294 ACGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 2138261 >seq6 Length=2834147 Score = 127 bits (140), Expect = 5e-24 Identities = 139/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || || ||||| || || || ||||| |||| |||||| | || || ||| Sbjct 1117940 ACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCG 1117881 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || || || || || ||||| || Sbjct 1117880 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGG 1117821 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || ||||||||||| || || || || |||| ||||| Sbjct 1117820 ATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTAATGGTCTTA 1117761 Query 195112 CCTGT 195116 || || Sbjct 1117760 CCGGT 1117756 >seq1 Length=3718887 Score = 122 bits (134), Expect = 2e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| || | ||| || | || || ||| Sbjct 1834116 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 1834057 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || || ||||| || ||||| || Sbjct 1834056 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 1833997 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || ||||||||||| || || |||||||| | ||||| Sbjct 1833996 ATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTG 1833937 Query 195112 CCTGT 195116 || || Sbjct 1833936 CCCGT 1833932 >seq3 Length=3240826 Score = 118 bits (130), Expect = 2e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| |||| ||| || | || || ||| Sbjct 834967 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCCTCG 835026 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| ||||| || || || ||||| || Sbjct 835027 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGG 835086 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || ||||||||||| || || || || || | ||||| Sbjct 835087 ATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTA 835146 Query 195112 CCTGT 195116 || || Sbjct 835147 CCGGT 835151 >seq4 Length=3236612 Score = 102 bits (112), Expect = 2e-16 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 194963 TGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTT 195022 |||| || | |||||| | ||||| ||||||||||| || ||||||||||| || || | Sbjct 326235 TGTAGTCAGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCT 326294 Query 195023 GGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCG 195082 |||| || || ||||| || ||||| || || || ||| ||||| || || ||||||| Sbjct 326295 GGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTAACGTTGTCGATCGTGTCCG 326354 Query 195083 AACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | || || || || |||| ||||| || || Sbjct 326355 AGGACTCGACCTCGAGAGTAATGGTCTTGCCCGT 326388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109479951032972