Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq13 107 1e-18 seq10 104 2e-17 seq1 82.4 5e-11 >seq13 Length=1285846 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || || || ||| | ||| |||| |||||||| || ||||| || Sbjct 1261428 TCCTTCTGGATGTTGTAATCAGAGAGGGTACGTCCATCCTCCAGCTGCTTGCCGGCGAAA 1261369 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||| |||||| Sbjct 1261368 ATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 1261309 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || |||||| || | || || || ||||| || |||||||| || Sbjct 1261308 TCGATGGTATCCGAGGACTCAACCTCCAGAGTAATCGTCTTTCCAGTAAGAGTCTTGACG 1261249 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 1261248 AAGATCTGCATA 1261237 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || || | || |||| || ||||| |||||||| || Sbjct 1261200 TCCTTCTGGATGTTGTAGTCAGAGAGAGTACGACCATCCTCGAGCTGCTTTCCGGCGAAA 1261141 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||| |||||| Sbjct 1261140 ATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTG 1261081 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || || |||||| || | || || || || ||||| | ||||| ||| Sbjct 1261080 TCAATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTTGCCCGTCAACGTCTTGACA 1261021 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 1261020 AAGATCTGCAT 1261010 >seq10 Length=2164251 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || || | ||| |||| || ||||| ||||| || || Sbjct 2138710 TCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGTCCATCCTCGAGCTGCTTTCCAGCGAAG 2138651 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | |||||||||||| |||||| ||||| Sbjct 2138650 ATCAGGCGCTGCTGGTCGGGGGGGATCCCCTCCTTGTCCTGGATCTTCAACTTGACATTG 2138591 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || |||| || ||||| || || || |||||||| || Sbjct 2138590 TCGATCGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCAGTCAGAGTCTTGACG 2138531 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 2138530 AAGATCTGCATA 2138519 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| ||| | || | || || ||||| || || || || Sbjct 2138938 TCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAA 2138879 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||||| || ||| Sbjct 2138878 ATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTCACGTTG 2138819 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || |||| || || || || |||||||| |||||||| Sbjct 2138818 TCGATCGTGTCGGACGACTCGACCTCGAGAGTGATCGTCTTACCCGTGAGGGTCTTCACG 2138759 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 2138758 AAGATCTGCAT 2138748 Score = 89.7 bits (98), Expect = 3e-13 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 34806 TAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGG 34865 ||||| |||||| | || |||| || ||||| || || ||||| || || || |||||| Sbjct 2138412 TAGTCAGAAAGGGTACGACCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGG 2138353 Query 34866 TCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCG 34925 || | || | |||||||||||| ||||||| |||||| | || | ||| Sbjct 2138352 TCGGGGGGGATCCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCAGAC 2138293 Query 34926 GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | ||| || |||| ||| ||||| || || ||||| |||||| Sbjct 2138292 GACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGCGTCTTC 2138251 >seq1 Length=3718887 Score = 82.4 bits (90), Expect = 5e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||||||| | || | || || ||||| || ||||| || Sbjct 1834098 TCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 1834039 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| |||||| Sbjct 1834038 ATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 1833979 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960 | || | || || ||| || || | ||| ||||| || |||||||| Sbjct 1833978 TCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAG 1833929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633141049248