Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_019410.1 Length=221828 Score E Sequences producing significant alignments: (Bits) Value seq1 122 1e-22 seq7 86.0 9e-12 >seq1 Length=3718887 Score = 122 bits (134), Expect = 1e-22 Identities = 312/467 (67%), Gaps = 46/467 (10%) Strand=Plus/Plus Query 81968 AGGCGCCGGTCGAGCCGAAGCCGCCCGCGCCCCGTTCGGTGTCGTCCAGGCTATCGACCT 82027 |||| |||||||||||||||||||| ||||| || | |||| ||| ||| | ||||| Sbjct 1537070 AGGCACCGGTCGAGCCGAAGCCGCCGGCGCCGCGCTGGGTGCTGTCGAGGTCCTTGACCT 1537129 Query 82028 CGACGACCGGCACGATCAGGCACT--GTTCGAGGATGATCTGGGCGATGCGATCGCCGGG 82085 || | ||| | || |||| | | |||||||||| |||||||||||||||||| | Sbjct 1537130 CGCGAATGGGCGCCAT--GGCAATGCGCTCGAGGATGAGCTGGGCGATGCGATCGCCCTG 1537187 Query 82086 CTTGATCTCCACGGTCTCCCCGAAGAAGGGCGCGCCGAAGACGTC---------GGCCTG 82136 |||| || |||| | | || |||| | || ||| || | ||| Sbjct 1537188 GTTGA-CTGCACG-----TCAGCTGATGGGCCCACCTTAGAGCTCACTTTTGAAGTCCTC 1537241 Query 82137 CTTGCCGTGGTGGGTCAGGATGACCTTGACCTCGCCGGTGTAATCCTCGTCCACCACGCC 82196 | ||||| | |||| ||||||||||||||| ||| || ||| || ||||| Sbjct 1537242 GTCATTGTGGTTGAAGAGGACGACCTTGACCTCGCCACGGTAGTCACAGTCGACGACGCC 1537301 Query 82197 GGCCAGGACC---CCGATGCC---CTTGACGCCCAGGCCCGAGCGCGGGGCGACGCGGGC 82250 ||| | || ||||||| ||| | | ||||| |||||||| |||| |||| | Sbjct 1537302 GGC---GCCCGTGTCGATGCCGTGCTTCGCCGCGAGGCCTGAGCGCGGCGCGATGCGGCC 1537358 Query 82251 GTAGGTTCCCTCGGGCG---CGGTGATCGAGAGGCCCGTCGACAGCAGGGCGCGATCGCC 82307 ||| || |||| ||| | |||||||| ||| | ||||| | || | ||| Sbjct 1537359 GTACGT---CTCGTGCGGAATCGCGATCGAGATGCCGGCCGACACTA---TGCCCTTGCC 1537412 Query 82308 GGGGTTCAGGCGCACCGTC---TTCTCGCCGTCGTAATAGACGTCCAGGCCGGCGGCCTT 82364 | | ||| ||| |||| | |||| | |||| || ||| |||||| | | Sbjct 1537413 GCGCTTC---GGCAGCGTCAGATCCTCGGCCGCGTACAAGTCGT---AGCCGGCCGACAG 1537466 Query 82365 GGGCGAGCCGCGCGTCGGGAGCTTGGCGGTTTGGGTCAGACGCTTGA 82411 ||| ||||||||||| || | ||||||| | || |||| |||||| Sbjct 1537467 GGGTGAGCCGCGCGTGGGCATCTTGGCGTTCGGGCTCAGGAGCTTGA 1537513 >seq7 Length=2824449 Score = 86.0 bits (94), Expect = 9e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 81971 CGCCGGTCGAGCCGAAGCCGCCCGCGCCCCGTTCGGTGTCGTCCAGGCTATCGACCTCGA 82030 |||| ||||| ||||| |||||| | || || | |||||||| || ||||||||||| Sbjct 299999 CGCCCGTCGACCCGAAACCGCCCTCTCCGCGCACCGTGTCGTCGAGCTCATCGACCTCGA 300058 Query 82031 CGACCGGCACGATCAGGCACTGTTCGAGGATGATCTGGGCGATGCGATCGCCGGGCTTGA 82090 | |||| | || || || |||||||||| |||||||||||| ||||| | |||| Sbjct 300059 CCGCCGGGGCCATTCGGACCTCCTCGAGGATGAGCTGGGCGATGCGGTCGCCAGCGTTGA 300118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709720570903680