Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_019411.1 Length=219216 Score E Sequences producing significant alignments: (Bits) Value seq1 123 3e-23 seq7 86.0 9e-12 >seq1 Length=3718887 Score = 123 bits (136), Expect = 3e-23 Identities = 312/466 (67%), Gaps = 44/466 (9%) Strand=Plus/Plus Query 81125 AGGCGCCGGTCGAGCCGAAGCCGCCCGCGCCCCGTTCGGTGTCGTCCAGGCTATCGACCT 81184 |||| |||||||||||||||||||| ||||| || | |||| ||| ||| | ||||| Sbjct 1537070 AGGCACCGGTCGAGCCGAAGCCGCCGGCGCCGCGCTGGGTGCTGTCGAGGTCCTTGACCT 1537129 Query 81185 CGACGACCGGCACGATCAGGCACT--GTTCGAGGATGATCTGGGCGATGCGATCGCCGGG 81242 || | ||| | || |||| | | |||||||||| |||||||||||||||||| | Sbjct 1537130 CGCGAATGGGCGCCAT--GGCAATGCGCTCGAGGATGAGCTGGGCGATGCGATCGCCCTG 1537187 Query 81243 CTTGATCTCCACGGTCTCCCCGAAGAAGGGCGCGCCGAAGACGTC---------GGCCTG 81293 |||| || |||| | | || |||| | || ||| || | ||| Sbjct 1537188 GTTGA-CTGCACG-----TCAGCTGATGGGCCCACCTTAGAGCTCACTTTTGAAGTCCTC 1537241 Query 81294 CTTGCCGTGGTGGGTCAGGATGACCTTGACCTCGCCGGTGTAGTCCTCGTCCACCACGCC 81353 | ||||| | |||| ||||||||||||||| |||||| ||| || ||||| Sbjct 1537242 GTCATTGTGGTTGAAGAGGACGACCTTGACCTCGCCACGGTAGTCACAGTCGACGACGCC 1537301 Query 81354 GGCCAGGACC---CCGATGCC---CTTGACGCCCAGGCCCGAGCGCGGCGCGACGCGGGC 81407 ||| | || ||||||| ||| | | ||||| ||||||||||||| |||| | Sbjct 1537302 GGC---GCCCGTGTCGATGCCGTGCTTCGCCGCGAGGCCTGAGCGCGGCGCGATGCGGCC 1537358 Query 81408 ATAGGTTCCCTCGGGCG---CGGTGATCGAGAGGCCCGTCGACAGCAGGGCGCGATCGCC 81464 || || |||| ||| | |||||||| ||| | ||||| | || | ||| Sbjct 1537359 GTACGT---CTCGTGCGGAATCGCGATCGAGATGCCGGCCGACACTA---TGCCCTTGCC 1537412 Query 81465 GGGGTTCAG--GCGCACTGTCGTCTCGCCGTCGTAATAGACGTCCAGGCCGGCGGCCTTG 81522 | | ||| | ||| || |||| | |||| || ||| |||||| | | | Sbjct 1537413 GCGCTTCGGCAGCGTCAGATC--CTCGGCCGCGTACAAGTCGT---AGCCGGCCGACAGG 1537467 Query 81523 GGCGAGCCCCGCGTCGGGAGCTTGGCGGTCTGGGTCAGGCGCTTGA 81568 || ||||| ||||| || | ||||||| || || ||||| |||||| Sbjct 1537468 GGTGAGCCGCGCGTGGGCATCTTGGCGTTCGGGCTCAGGAGCTTGA 1537513 >seq7 Length=2824449 Score = 86.0 bits (94), Expect = 9e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 81128 CGCCGGTCGAGCCGAAGCCGCCCGCGCCCCGTTCGGTGTCGTCCAGGCTATCGACCTCGA 81187 |||| ||||| ||||| |||||| | || || | |||||||| || ||||||||||| Sbjct 299999 CGCCCGTCGACCCGAAACCGCCCTCTCCGCGCACCGTGTCGTCGAGCTCATCGACCTCGA 300058 Query 81188 CGACCGGCACGATCAGGCACTGTTCGAGGATGATCTGGGCGATGCGATCGCCGGGCTTGA 81247 | |||| | || || || |||||||||| |||||||||||| ||||| | |||| Sbjct 300059 CCGCCGGGGCCATTCGGACCTCCTCGAGGATGAGCTGGGCGATGCGGTCGCCAGCGTTGA 300118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701362183023360