Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2 116 1e-20 seq4 102 2e-16 seq8 96.9 1e-14 >seq2 Length=3385878 Score = 116 bits (128), Expect = 1e-20 Identities = 227/331 (69%), Gaps = 6/331 (2%) Strand=Plus/Minus Query 302491 TCAATTCCGTCATCGCCGTA--GGAATACTGAATGATTTTGTTCTTGTTATTTCTTACGG 302548 || |||||||| |||||||| |||| ||| ||||| | | | || | |||| Sbjct 2142580 TCCATTCCGTCCTCGCCGTAAAGGAA--CTGGATGATGTCGCCTCCGGAGTTACGGACGG 2142523 Query 302549 TCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAAC 302608 | ||||| || | | | | ||| ||||| |||| | ||||||||| || |||| Sbjct 2142522 TTCCGTCATATCCGACCTTCAAGTCCTCCATCGCTTTGACGAGACGACGCTGGATGTAAC 2142463 Query 302609 CAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGA 302668 |||| | || || || || || ||||| ||||| ||||||||||||| || |||| Sbjct 2142462 CAGTCTCGGCAGTCTTGACCGCAGTGTCAATAAGACCTTCACGACCACCCATGGCGTGGA 2142403 Query 302669 AGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCC 302727 |||| | ||||| ||| ||| || || | || | ||| |||| ||||| ||||| | | Sbjct 2142402 AGAAGAACTCTTGCGG-CGTCAGACCACGAAGGTATGAGTTCTCCACGAATCCACGGGAC 2142344 Query 302728 TCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGG 302787 || || || |||| ||| | ||||| ||||| || | || ||||| | || Sbjct 2142343 TCAGGTCCATAGTCGTCCTTTGAGAAGTGGGGCAGCGTGCGGTGGCGGAAGCCGAACGGA 2142284 Query 302788 ATACGCTTTCCATCAACGTTCTGCTGTCCCA 302818 || || || || ||||| |||| || |||| Sbjct 2142283 ATGCGTTTACCCTCAACAATCTGTTGACCCA 2142253 Score = 93.3 bits (102), Expect = 1e-13 Identities = 359/561 (64%), Gaps = 5/561 (1%) Strand=Plus/Minus Query 155943 GCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAG 156002 || ||||||||||| | || ||| || | ||||| ||||| || || || | | Sbjct 568323 GCGTAGAAAAGGTCACGCGCACGGACCTCTTCCTTCCCGTGGTTCTTACGGAGGTCGAGG 568264 Query 156003 AATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG 156062 || || || || | || ||||| || || || || || ||| || |||| Sbjct 568263 AAGTCAAAGATGTCGGCGTGCCAAGGCTCAAGGTAGATGGCGAAGGCACCGGGCCGCTTG 568204 Query 156063 ---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119 |||||||| || || || || ||||| | | || ||| ||||| || | ||| Sbjct 568203 TTACCACCCTGGTCAACGTAACGGGCAGTAGCGTCGTAGGCACGAAGCATGGGGACGATA 568144 Query 156120 CCATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAACCAGATGAGCGAACATTATGAAT 156178 || || || || || || || |||| | | ||| || | || | || || || Sbjct 568143 CCGTTAGAGTAACCGTTCGTACCAGCGA-TGTACGAGCCCTTCGCACGGATGTTGTGGAT 568085 Query 156179 ATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAA 156238 ||| || || || || || | || ||||| || ||||| ||| | ||| | | | Sbjct 568084 ATGAAGACCGATGCCGCCGGCAGTCTTTGAAATCTGTGCGCAGGTCTTGAGAGTGTCGTA 568025 Query 156239 AATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCG 156298 |||||| ||||| || || || | ||| | | || |||| || | || | | Sbjct 568024 AATACCGTCAATGGAGTCGTCCTTCATGGCGACGAGGAAGCAGGACGACATCTGGGCGTG 567965 Query 156299 TGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATA 156358 || || || | |||||| || || |||| || || | || ||| | |||||| Sbjct 567964 AGGGGTGCCCGAGTTGAAGAGCGTCGGTGAGGCGTGCGTGAAGTACCGCTCGGACATAAG 567905 Query 156359 ATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCAT 156418 | ||| ||||| | | |||||||| || ||||| || | | || || | ||| Sbjct 567904 GTTGTACGTCTCGATGACCTTCTCAATGTTGTCGCCGTGGATGCCAACGGAAACACGCAT 567845 Query 156419 CCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTC 156478 | |||||||||||| |||||| ||||| || || || || || ||||| | ||| || Sbjct 567844 CAGCATATGCTGAGGGCGCTCTGCAATCTTGCCGTCGATGCGGAGGAGGTAGGAGCGCTC 567785 Query 156479 CAGAGTTTTAAACCCGAAATA 156499 || || || || ||||| || Sbjct 567784 GAGGGTCTTGAAACCGAAGTA 567764 >seq4 Length=3236612 Score = 102 bits (112), Expect = 2e-16 Identities = 113/148 (76%), Gaps = 6/148 (4%) Strand=Plus/Minus Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902 |||| ||||||||| ||||| || ||||| ||||||||||||||||| | | || | Sbjct 1857384 CGATTGTCATACGAGACGGAATGGCGTGGGGGTTGATGATGATGTCGGGAGTGATGCCCT 1857325 Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCT--CAATA-ATGTTTCCAATAGTTCCCTTTTGTC 251959 |||| ||||| ||||| ||| |||| | ||| || | || || || ||||| |||| Sbjct 1857324 CAGCCGTGAACGGCATGTCC---TCCTGGCGATAGGTGATACCGATCGTACCCTTCTGTC 1857268 Query 251960 CGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||| || |||||| |||||||| Sbjct 1857267 CGTGACGCGAGGCGAACTTGTCACCAAT 1857240 Score = 95.1 bits (104), Expect = 4e-14 Identities = 114/153 (75%), Gaps = 4/153 (3%) Strand=Plus/Minus Query 251503 CAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGC 251562 ||||| |||||||| || ||||| ||||| |||||||| |||| | ||| ||| ||||| Sbjct 1857724 CAATCGCGCTCCATCTCGCCGAATCGAAGGCCACCATCACGAGAACGACCTTCGACAGGC 1857665 Query 251563 TGACGAGTGAGATTAACCATAGGACCGATGGAGC--GGCTATGTTGCTTATCATTTACCA 251620 ||||| || ||| | | || || | |||| || || ||| |||| |||| Sbjct 1857664 TGACGGGTCAGAATTTGGAGCGGTCC--TCGAGCTCGGGCGTGGATCTTGTCATCGACCA 1857607 Query 251621 TATGCTTGAGACGCTGGTAGAATGCGGGACCGA 251653 ||||||||||||||||||| | | |||||||| Sbjct 1857606 TATGCTTGAGACGCTGGTAATAAGTGGGACCGA 1857574 >seq8 Length=2605587 Score = 96.9 bits (106), Expect = 1e-14 Identities = 171/247 (69%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 302571 GTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGC 302630 ||| ||||| ||| | | ||||||||| || ||||||||| | || || || || Sbjct 408893 GTCCTCCATCGCCTTCACGAGACGACGCTGGATGTAACCAGTTTCGGCGGTCTTGACCGC 408952 Query 302631 TGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-A 302689 |||||||| ||||| ||||||||||||| || |||||||| | ||| | ||| ||| | Sbjct 408953 AGTATCAATGAGACCCTCACGACCACCCATGGCGTGGAAGAAGAACTCCTGCGG-CGTCA 409011 Query 302690 GCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGG 302749 || | || | ||| |||| ||||| ||||||| || || | ||| ||| | Sbjct 409012 AACCACGAAGGTACGAGTTCTCGACGAATCCACGCGATTCCGGTCCGTAGTCATCCTTCG 409071 Query 302750 TAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCT 302809 || || || || || | || | ||| | || ||||||||||| || ||| ||| Sbjct 409072 AGAAATGAGGAAGAGTGCGGTGACGGAATCCGAACGGAATACGCTTTCCTTCCACGATCT 409131 Query 302810 GCTGTCC 302816 | || || Sbjct 409132 GTTGACC 409138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471815412511092