Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq13 125 5e-24 seq10 122 6e-23 seq1 122 6e-23 seq3 104 2e-17 seq6 98.7 6e-16 >seq13 Length=1285846 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | |||| ||||||||| ||||| ||||| || || | || |||| Sbjct 1261221 AGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTACGACCATCC 1261162 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||||||||| ||||| || |||||||| | || | ||||||||||| Sbjct 1261161 TCGAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 1261102 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || || ||| || |||| || || ||| Sbjct 1261101 TGAATCTTGCTCTTGACGTTGTCAATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTC 1261042 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| | ||||| |||||||||||||| Sbjct 1261041 TTGCCCGTCAACGTCTTGACAAAGATCTGCAT 1261010 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| ||||| || || || ||| | || |||| Sbjct 1261449 AGGACGAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGAGAGGGTACGTCCATCC 1261390 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| |||||||| ||||| || |||||||| | || | ||||||||||| Sbjct 1261389 TCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 1261330 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || || ||| || || | || || ||| Sbjct 1261329 TGGATCTTCGACTTGACGTTGTCGATGGTATCCGAGGACTCAACCTCCAGAGTAATCGTC 1261270 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || ||||| || ||||||||||| Sbjct 1261269 TTTCCAGTAAGAGTCTTGACGAAGATCTGCAT 1261238 Score = 95.1 bits (104), Expect = 8e-15 Identities = 127/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| || ||| |||| | || || || ||||| || ||||| Sbjct 1260973 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 1260914 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || |||||||| | || | || |||||||| | || || |||||| Sbjct 1260913 GATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTCGACTTGACGTT 1260854 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTT 34962 | || | || | ||| || |||| ||| |||||||| || ||||||||||| Sbjct 1260853 GTCGATGGTGTCGGACGACTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTT 1260797 >seq10 Length=2164251 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || |||| || ||||||||| ||||| ||||| || || |||| |||| Sbjct 2138731 AGGACAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGTCCATCC 2138672 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| ||||||||||| || |||||||| | || | |||||||||||| Sbjct 2138671 TCGAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATCCCCTCCTTGTCC 2138612 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||| | |||| || | |||||| || | || |||||| Sbjct 2138611 TGGATCTTCAACTTGACATTGTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATGGTC 2138552 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || ||||| || ||||||||||| Sbjct 2138551 TTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 2138520 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | || ||||||||| ||||| |||||||| ||| |||| | || Sbjct 2138959 AGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 2138900 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || ||||| || || || |||||||| | || | ||||||||||| Sbjct 2138899 TCGAGCTGCTTACCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 2138840 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | |||| || | |||||| || | || || ||| Sbjct 2138839 TGAATCTTCGACTTCACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATCGTC 2138780 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||||||||| || ||||||||||| Sbjct 2138779 TTACCCGTGAGGGTCTTCACGAAGATCTGCAT 2138748 >seq1 Length=3718887 Score = 122 bits (134), Expect = 6e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| ||||| |||||||| ||| |||| | || Sbjct 1834119 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 1834060 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || || |||||||| | || | ||||||||||| Sbjct 1834059 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 1834000 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || || |||||| |||| ||| |||||| Sbjct 1833999 TGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTC 1833940 Query 34946 TTTCCCGTGAGG 34957 || ||||||||| Sbjct 1833939 TTGCCCGTGAGG 1833928 >seq3 Length=3240826 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| ||||| ||||| || ||| |||| | || Sbjct 834964 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCC 835023 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || || |||||||| | || | ||||||||||| Sbjct 835024 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 835083 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || || |||||| || | || |||||| Sbjct 835084 TGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTGATGGTC 835143 Query 34946 TTTCCCGTGAGG 34957 || || |||||| Sbjct 835144 TTACCGGTGAGG 835155 >seq6 Length=2834147 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| ||||| ||||| || || |||| | || Sbjct 1117943 AGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCC 1117884 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || || |||||||| | || | ||||||||||| Sbjct 1117883 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCC 1117824 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || || |||||| || | || |||||| Sbjct 1117823 TGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTAATGGTC 1117764 Query 34946 TTTCCCGTGAGG 34957 || || |||||| Sbjct 1117763 TTACCGGTGAGG 1117752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692339551804