Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq13 98.7 7e-16 seq10 84.2 1e-11 >seq13 Length=1285846 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| || ||||| || || | || || | || Sbjct 1261212 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTACGACCATCCTCGAGCTGC 1261153 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT- 33665 |||||||| ||||||| |||||||| || | || | ||| || ||||| ||| || Sbjct 1261152 TTTCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGAATCTTG 1261093 Query 33666 CTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 || || || | |||| ||||| || || || |||| ||||||||| || || | Sbjct 1261092 CTCTTG--ACGTTGTCAATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTTGCCCG 1261035 Query 33725 TTAACGTTTTTACAAAGATCTGCAT 33749 | ||||| || |||||||||||||| Sbjct 1261034 TCAACGTCTTGACAAAGATCTGCAT 1261010 Score = 84.2 bits (92), Expect = 1e-11 Identities = 160/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578 || ||| || | || ||| | || | || |||||| ||| || || ||||||||||| Sbjct 1261468 GTGACCTCCACGCAGACGAAGGACGAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATC 1261409 Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638 ||||| || ||| | || |||| || || ||||| ||||||| |||||||| || | Sbjct 1261408 AGAGAGGGTACGTCCATCCTCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGG 1261349 Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATT 33697 || | ||| || ||||| || ||| | | || | ||| | ||| || || | Sbjct 1261348 GGGAATACCCTCCTTGTCCTGGATCTTC-GACTTGACGTTGTCGATGGTATCCGAGGACT 1261290 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || | || ||||| || || || | || || || |||||||||||| Sbjct 1261289 CAACCTCCAGAGTAATCGTCTTTCCAGTAAGAGTCTTGACGAAGATCTGCATA 1261237 >seq10 Length=2164251 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || |||||||| || ||||| ||||| |||| || | || || || || || Sbjct 2138939 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAA 2138880 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 ||| | ||||||||| || | || | || || ||||| ||| ||| |||| | | Sbjct 2138879 AATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTCA-CGT 2138821 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | |||||| || || || || | |||||||| ||||| || | || || | Sbjct 2138820 TGTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATCGTCTTACCCGTGAGGGTCTTCA 2138761 Query 33737 CAAAGATCTGCAT 33749 | ||||||||||| Sbjct 2138760 CGAAGATCTGCAT 2138748 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | || | ||| ||||| ||| || || |||||||| |||||| Sbjct 2138746 CCACCGCGGAGACGGAGGACAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAG 2138687 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || |||||| | || || | || ||||| || || |||| |||||||| || | || Sbjct 2138686 AGCGTGCGTCCATCCTCGAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 2138627 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| || ||| || | ||| ||| | |||||| || || || Sbjct 2138626 ATCCCCTCCTTGTCCTGGATCTTCAACTTGA-CATTGTCGATCGTGTCGGACGACTCGAC 2138568 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || || || || | || || || |||||||||||| Sbjct 2138567 CTCGAGAGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCATA 2138519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703535294720