Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq10 132 4e-26 seq13 114 1e-20 seq3 82.4 7e-11 >seq10 Length=2164251 Score = 132 bits (146), Expect = 4e-26 Identities = 148/195 (76%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || |||| || ||||||||||| || || Sbjct 2138939 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAA 2138880 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||||| || |||||||||| ||||| ||||| || Sbjct 2138879 AATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTCA-CGT 2138821 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||||| ||| || ||||| | |||||||| |||||||| | || |||| Sbjct 2138820 TGTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATCGTCTTACCCGTGAGGGTCTTCA 2138761 Query 35724 CAAATATCTGCATTC 35738 | || |||||||||| Sbjct 2138760 CGAAGATCTGCATTC 2138746 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | || || | || || |||||||| || || || Sbjct 2138711 CTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGTCCATCCTCGAGCTGCTTTCCAGCGAA 2138652 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | || | | |||||||||| |||||| ||| | | | Sbjct 2138651 GATCAGGCGCTGCTGGTCGGGGGGGATCCCCTCCTTGTCCTGGATCTTCAACTTGACATT 2138592 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||||| ||| || ||||| | ||||| || || || |||| ||| || || Sbjct 2138591 GTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCAGTCAGAGTCTTGAC 2138532 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 2138531 GAAGATCTGCAT 2138520 >seq13 Length=1285846 Score = 114 bits (126), Expect = 1e-20 Identities = 144/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | || || | || || |||||||| || || || Sbjct 1261201 CTCCTTCTGGATGTTGTAGTCAGAGAGAGTACGACCATCCTCGAGCTGCTTTCCGGCGAA 1261142 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| |||| | |||||||||| ||||| ||| | || Sbjct 1261141 AATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGAATCTTGCTCTTGA-CGT 1261083 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || ||||| | ||||||||| || |||||||| || || | Sbjct 1261082 TGTCAATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTTGCCCGTCAACGTCTTGA 1261023 Query 35724 CAAATATCTGCATTC 35738 |||| |||||||||| Sbjct 1261022 CAAAGATCTGCATTC 1261008 Score = 102 bits (112), Expect = 7e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| | | ||| || | || ||||||||||| || || || Sbjct 1261429 CTCCTTCTGGATGTTGTAATCAGAGAGGGTACGTCCATCCTCCAGCTGCTTGCCGGCGAA 1261370 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| |||| | |||||||||| |||||| ||| | || Sbjct 1261369 AATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTCGACTTGA-CGT 1261311 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || || || || ||||||| || ||||| || || || | ||| || | Sbjct 1261310 TGTCGATGGTATCCGAGGACTCAACCTCCAGAGTAATCGTCTTTCCAGTAAGAGTCTTGA 1261251 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 1261250 CGAAGATCTGCAT 1261238 Score = 91.5 bits (100), Expect = 1e-13 Identities = 123/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || |||| || |||||||| || || || Sbjct 1260973 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 1260914 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||| | || ||||||||| |||||| ||| | || Sbjct 1260913 GATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTCGACTTGA-CGT 1260855 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 || | | |||||| ||| || ||||| | ||||| || || || || Sbjct 1260854 TGTCGATGGTGTCGGACGACTCAACCTCAAGGGTGATGGTCTTGCCGGT 1260806 >seq3 Length=3240826 Score = 82.4 bits (90), Expect = 7e-11 Identities = 121/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | ||| || |||| || |||||||| || || || Sbjct 834984 CTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 835043 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||| | | |||||||||| |||||| ||| | || Sbjct 835044 GATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGA-CGT 835102 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 || | | ||||| || || ||||| | ||||| || ||||| || Sbjct 835103 TGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTACCGGT 835151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792946349280