Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24]
116 sequences; 40,322,879 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq10 127 2e-24
seq13 122 9e-23
seq6 118 1e-21
seq3 118 1e-21
seq1 104 2e-17
>seq10
Length=2164251
Score = 127 bits (140), Expect = 2e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| ||||| || ||||| || ||||||||||| | |||| | ||| |||
Sbjct 2138956 ACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCG 2138897
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| || || || ||||| | ||||||||| || || || ||||| || || || |||
Sbjct 2138896 AGCTGCTTACCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGA 2138837
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || || || ||| | ||||||||||| || || |||||||| || || |||
Sbjct 2138836 ATCTTCGACTTCACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATCGTCTTA 2138777
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| || | || || ||||| || ||||||
Sbjct 2138776 CCCGTGAGGGTCTTCACGAAGATCTGCATT 2138747
Score = 116 bits (128), Expect = 4e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
|||| || | ||| || | || || || || || || ||||| || ||||||||||||
Sbjct 2138748 TTCCACCGCGGAGACGGAGGACAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGG 2138689
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
| ||| | || |||||||| || || || || |||| |||||||| ||||| |
Sbjct 2138688 AGAGCGTGCGTCCATCCTCGAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCGGGGG 2138629
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| || || || || || || || || ||||| ||| | ||||||||||| || |
Sbjct 2138628 GGATCCCCTCCTTGTCCTGGATCTTCAACTTGACATTGTCGATCGTGTCGGACGACTCGA 2138569
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
| |||||||| ||||| || || || | ||| || ||||| || |||||
Sbjct 2138568 CCTCGAGAGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 2138520
>seq13
Length=1285846
Score = 122 bits (134), Expect = 9e-23
Identities = 150/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
|||| || | ||| || | || || || ||||| || ||||| || ||||||||||||
Sbjct 1261010 TTCCACCGCGGAGACGAAGAACAAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGG 1260951
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
| |||| | ||| |||||||| ||||| || || || | ||||||||| ||||| |
Sbjct 1260950 ACAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAG 1260891
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| |||||||| || || || || || ||||| ||| | ||||||||||| || |
Sbjct 1260890 GGATGCCTTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGGACGACTCAA 1260831
Query 134665 CGTCGAGAGTAATGGTTTTACCGGT 134689
| || || || ||||| || |||||
Sbjct 1260830 CCTCAAGGGTGATGGTCTTGCCGGT 1260806
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| || ||||| ||||| || ||||||||||| | || || || |||
Sbjct 1261218 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTACGACCATCCTCG 1261159
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| || || || ||||||| |||||||| || || || || || || || || |||
Sbjct 1261158 AGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGA 1261099
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| ||| | ||||| || || || || || || || || || ||
Sbjct 1261098 ATCTTGCTCTTGACGTTGTCAATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTTG 1261039
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| || || || || || || || ||||||
Sbjct 1261038 CCCGTCAACGTCTTGACAAAGATCTGCATT 1261009
>seq6
Length=2834147
Score = 118 bits (130), Expect = 1e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || ||||| || || || ||||| || |||||||||||| |
Sbjct 1117958 CCACCACGGAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAA 1117899
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| |||||||| ||||| || || || | ||||||||| ||||| ||
Sbjct 1117898 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGG 1117839
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || ||||| ||| | ||||| || || || ||
Sbjct 1117838 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 1117779
Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689
|||||||||||||| ||||||||
Sbjct 1117778 TCGAGAGTAATGGTCTTACCGGT 1117756
>seq3
Length=3240826
Score = 118 bits (130), Expect = 1e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | |||||||| || || || ||||| || |||||||||||| |
Sbjct 834949 CCACCACGGAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAA 835008
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| |||||||| ||||| || || || | ||||||||| || || ||
Sbjct 835009 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGAGGG 835068
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || ||||| ||| | ||||| || || || ||
Sbjct 835069 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 835128
Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689
|||||||| ||||| ||||||||
Sbjct 835129 TCGAGAGTGATGGTCTTACCGGT 835151
>seq1
Length=3718887
Score = 104 bits (114), Expect = 2e-17
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|||||||| || || || ||||| || ||||||||||| || |||| | ||| |||
Sbjct 1834116 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 1834057
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| || || || | ||||||||| ||||| || ||||| || || || ||
Sbjct 1834056 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 1833997
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| ||| | ||||| || || || || || || || ||||| ||
Sbjct 1833996 ATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTG 1833937
Query 134685 CCGGT 134689
|| ||
Sbjct 1833936 CCCGT 1833932
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505397667172320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |