Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24]
116 sequences; 40,322,879 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq16 87.8 2e-12
>seq16
Length=836766
Score = 87.8 bits (96), Expect = 2e-12
Identities = 192/285 (67%), Gaps = 2/285 (1%)
Strand=Plus/Plus
Query 39632 TGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCA 39691
|| ||||||||||| | ||| || | ||||| || |||||||| || |||| || ||
Sbjct 439956 TGCAGGCCCTCATCGCGACTGATGAGCTCGTTGGAGAATGTGAGCCCTTGCATGAGCCCG 440015
Query 39692 CGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCT 39751
||||| || ||||| || || || || || ||||| || ||||| ||||| || ||
Sbjct 440016 CGCTTCTTCAGCCAGAAGATTGCGGCGAATGATCCGGAGAAGAAAATGCCCTCCACACAA 440075
Query 39752 GCAAATGCAACAAGTCTCTCTCCGTAACTTG-TATCATTATGTATCCACTTCTGTGCCCA 39810
||||| |||| || | | |||| || | ||| | || ||||| ||||||
Sbjct 440076 GCAAACGCAATCAGGC-GTATCCGGAAAGGGACATCGCTGGTAATGTACTTCATTGCCCA 440134
Query 39811 ATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTC 39870
|| || ||||||| | || || || | || || | || || | ||| ||| ||
Sbjct 440135 GTCTGCCTTCTTCTGGATGCAGGGGATGTTCTCCATCCCCTTGAACAAGAAATCTTTCTC 440194
Query 39871 ATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTC 39915
| | |||| || || || || || |||||||| || ||||
Sbjct 440195 TGCTTTGTCTTGGACGTAGGTTTCGATCAACAGACTGTATGTTTC 440239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686907803982240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |