Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq16 87.8 1e-12 seq2 86.0 5e-12 >seq16 Length=836766 Score = 87.8 bits (96), Expect = 1e-12 Identities = 208/309 (67%), Gaps = 4/309 (1%) Strand=Plus/Minus Query 43974 TTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGG-GCACGAGAAG 44032 |||| | |||| |||||||| |||| || || ||| || |||| ||| ||||| Sbjct 440247 TTCACGCCGAAACATACAGTCTGTTGATCGAAACCTACGTCCAAGACAAAGCA-GAGAAA 440189 Query 44033 CATCGATTGTTTAATGCGATAGA-AACAGTACCTGCGATTAAACATAAAGCAGACTGGGC 44091 || ||||| || | ||| || |||| ||||| || | | || ||||||||||| Sbjct 440188 GATTTCTTGTTCAAGGGGATGGAGAACATCCCCTGC-ATCCAGAAGAAGGCAGACTGGGC 440130 Query 44092 CCTTAAATGGATAAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGT 44151 | || | || | ||| |||| | ||| || | |||||||| ||| Sbjct 440129 AATGAAGTACATTACCAGCGATGTCCCTTTCCGGATACGCCTGATTGCGTTTGCTTGTGT 440070 Query 44152 GGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTT 44211 ||| ||||||||||| || ||||| || || || || || ||| | ||||| || || | Sbjct 440069 GGAGGGCATTTTCTTCTCCGGATCATTCGCCGCAATCTTCTGGCTGAAGAAGCGCGGGCT 440010 Query 44212 GATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGA 44271 |||| ||| | || || || || ||| | || ||||| ||||| ||| | || || Sbjct 440009 CATGCAAGGGCTCACATTCTCCAACGAGCTCATCAGTCGCGATGAGGGCCTGCACACGGA 439950 Query 44272 TTTTGCTTG 44280 ||| ||||| Sbjct 439949 TTTCGCTTG 439941 >seq2 Length=3385878 Score = 86.0 bits (94), Expect = 5e-12 Identities = 209/311 (67%), Gaps = 8/311 (3%) Strand=Plus/Minus Query 43974 TTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC 44033 |||| | |||| ||||||||| |||| || || ||| || |||| | ||||||| Sbjct 3154955 TTCACGCCGAAACGTACAGTCTGTTGATCGAGACCTACGTCCAAGACAAGGCCGAGAAGG 3154896 Query 44034 ATCGATTGTTTAATGCGATAGA-AACAGTACCTGCGATTAAACATAAAGCAGACTGGGCC 44092 | |||| || | || || |||| ||||| || || | || ||||||||||| Sbjct 3154895 ACTTTCTGTTCAAAGGAATGGAGAACATCCCCTGC-ATCCAAAAGAAGGCAGACTGGGCG 3154837 Query 44093 CTTAAATGGATAAATTCAAATGA--TTCTTTTGGAGA-ACGACTTGTCGCGTTTGCAGTT 44149 | || | || | | | || | | ||| || ||| | | |||||||| | Sbjct 3154836 ATGAAGTACATTA---CCGACGAGGTGCCTTTCCGGATACGTTTGATTGCGTTTGCCTGT 3154780 Query 44150 GTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGT 44209 ||||| ||||| || || || || ||||||||||| || || ||| | ||||| || ||| Sbjct 3154779 GTGGAGGGCATCTTTTTCTCGGGGTCGTTTGCGGCGATCTTCTGGCTGAAGAAGCGTGGT 3154720 Query 44210 TTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGC 44269 | |||| || |||| || || |||||| | || ||||| || || || | || Sbjct 3154719 CTCATGCAAGGCCTGACCTTCTCGAATGAGCTCATCAGTCGAGACGAGGGTCTGCACACG 3154660 Query 44270 GATTTTGCTTG 44280 || |||||||| Sbjct 3154659 GACTTTGCTTG 3154649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455438096580