Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 1e-14 seq16 95.1 4e-14 >seq2 Length=3385878 Score = 96.9 bits (106), Expect = 1e-14 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 443767 ATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATC 443826 ||||||||| |||| |||||||| || ||||| || |||||||| || || || ||| Sbjct 3154743 ATCTTCTGGCTGAAGAAGCGTGGTCTCATGCAAGGCCTGACCTTCTCGAATGAGCTCATC 3154684 Query 443827 AGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACA 443872 ||||| ||||||||| |||| ||||| || ||||||||||||| Sbjct 3154683 AGTCGAGACGAGGGTCTGCACACGGACTTTGCTTGTCTTCTCTACA 3154638 Score = 87.8 bits (96), Expect = 6e-12 Identities = 125/175 (71%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 443700 TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTT 443759 |||| |||||| || |||| || |||| || || || | || || ||| | || Sbjct 2876732 TTCGGCGAGCGCCTCATCGCGTTCGCTGCCGTTGAGGGTATCTTCTTCTCAGGCT-CGTT 2876790 Query 443760 AGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGA 443819 || |||||||||||| |||| ||||| || || |||| ||| || || || ||||| Sbjct 2876791 CGCGTCCATCTTCTGGCTGAAGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCCAACGA 2876850 Query 443820 ACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACC 443874 || ||| || ||||||||| | || |||||||||||| || |||| |||| Sbjct 2876851 GCTCATCTCGCGCGACGAGGGTCTCCACACCGACTTCGCCTGCCTGCTCTTCACC 2876905 >seq16 Length=836766 Score = 95.1 bits (104), Expect = 4e-14 Identities = 126/174 (72%), Gaps = 1/174 (1%) Strand=Plus/Plus Query 443700 TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTT 443759 |||| |||||| || |||| || || | ||||| || | || || ||| | || Sbjct 122427 TTCGGCGAGCGCCTCATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCT-CGTT 122485 Query 443760 AGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGA 443819 ||||||||||||||| |||| ||||| || || |||| ||| || || || ||||| Sbjct 122486 CGCCTCCATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGCCTCACGTTCTCGAACGA 122545 Query 443820 ACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACAC 443873 || ||| || ||||||||| |||| |||||||||||| || |||| ||| Sbjct 122546 GCTCATCTCGCGCGACGAGGGTCTGCACACCGACTTCGCCTGCCTGCTCTTCAC 122599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588333639335620