Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2 122 1e-22 seq16 111 2e-19 >seq2 Length=3385878 Score = 122 bits (134), Expect = 1e-22 Identities = 280/414 (68%), Gaps = 6/414 (1%) Strand=Plus/Minus Query 122481 GAGGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGAT 122540 ||||||||| || | || |||| ||||||| | |||| || | |||||| ||||| Sbjct 2877067 GAGGAGACGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGAT 2877008 Query 122541 GAGGTTACAT-GGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCA 122599 ||| ||| ||||| || || || |||| | | |||||||| || ||||| || | Sbjct 2877007 GAGCG-ACACCGGGAGGGCCTCGGTGAGGAACTCCTGCTCAATCTTGACGGCCTCCTTGA 2876949 Query 122600 CGATGGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGG 122659 ||| || ||| || || | ||| | || | |||||||| || Sbjct 2876948 TGATCTTGTTGATCGTGTCCGGGTGGGGACGGCGGCGGAGGTGGGTGAAGAGCAGGCAGG 2876889 Query 122660 CAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTG 122719 | || || |||||||||||| || || || || || || || ||||| || || | Sbjct 2876888 CGAAGTCGGTGTGGAGACCCTCGTCGCGCGAGATGAGCTCGTTGGAGAACGTGAGGCCGG 2876829 Query 122720 GCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATA 122778 ||||||| || |||||||||| ||| | || | ||| ||| || || |||||||||||| Sbjct 2876828 GCATGAGGCCGCGCTTCTTCAGCCAGAAGATGGACGC-GAACGAGCCTGAGAAGAAGATA 2876770 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAA 122837 ||||| || || ||||| | ||||| ||| |||| ||| ||| || | | || Sbjct 2876769 CCCTCAACGGCAGCGAACGCGATGAGGCGCTCGCCGAACGAG-GAGCGTTGGTCGGAAAT 2876711 Query 122838 CCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 122891 ||| || ||||| | |||||||||| || || || | || | |||||| Sbjct 2876710 CCACCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGC 2876657 Score = 118 bits (130), Expect = 1e-21 Identities = 355/539 (66%), Gaps = 17/539 (3%) Strand=Plus/Minus Query 111556 CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACC 111614 ||| || ||||||||||| ||||| | ||||| |||| | || || || | ||| Sbjct 568360 CTCGACACGCTTCATGAACAGGTCGGAGATCCAGAGGGCGTAGAAAAGGTCACGCGCACG 568301 Query 111615 GAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCC 111674 || ||||||| | || ||||| || | || ||||| || | ||| || ||||||| Sbjct 568300 GA-CCTCTTCCTTCCCGTGGTTCTTACGGAGGTCGAGGAAGTCAAAGATGTCGGCGTGCC 568242 Query 111675 ATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACAT 111728 | |||||||| |||| |||| | || | ||| ||| | || | || | Sbjct 568241 AAGGCTCAAGGTAGATGGCGAAGGCACCGG---GCCGCTTGTTACCACCCTGGTCAACGT 568185 Query 111729 AGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG 111788 | || || || |||| | | |||||||| || | ||||| | || | ||| || | Sbjct 568184 AACGGGCAGTAGCGTCGTAGGCACGAAGCATGGGGACGATACCGTTAGAGTAACCGTTCG 568125 Query 111789 TCCCC-CGAA-TACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCC 111846 | || ||| |||||| | | || | | | ||||| || | || || || || Sbjct 568124 TACCAGCGATGTACGAGCCCT--TCGCACGGATGTTGTGGATATGAAGACCGATGCCGCC 568067 Query 111847 AGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTC 111906 || |||||| || || || || | | ||||| | || ||||||| || ||||| Sbjct 568066 GGCAGTCTTTGAAATCTGTGCGCAGGTCTTGAGAGTGTCGTAAATACCGTCAATGGAGTC 568007 Query 111907 CTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAA 111966 ||||| |||||| |||||||| |||||||| | || || || | ||||| Sbjct 568006 GTCCTTCATGGCGACGAGGAAGCAGGACGACATCTGGGCGTGAGGGGTGCCCGAGTTGAA 567947 Query 111967 GAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGA 112025 ||| || |||| ||||| |||| |||| | |||||| || ||| ||||| | || Sbjct 567946 GAGCGTCGGTGAGGCGTGCGTGAAG-TACCGCTCGGACATAAGGTTGTACGTCTCGATGA 567888 Query 112026 CAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGG 112084 | ||||||| || ||||||||||| | | || ||||| | ||| | ||| ||| Sbjct 567887 CCTTCTCAATGTTGTCGCCGTGGATGCCAACGGAAACACGCATCAGCATATGCTGAGGG 567829 Score = 116 bits (128), Expect = 5e-21 Identities = 113/143 (79%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| ||| ||| |||||||| ||||| || || ||||| |||||| || ||| Sbjct 3154652 GCAAAGTCCGTGTGCAGACCCTCGTCTCGACTGATGAGCTCATTCGAGAAGGTCAGGCCT 3154711 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 122777 |||||||||| |||||||||| ||| | || || ||| || ||||| ||||| ||||| Sbjct 3154712 TGCATGAGACCACGCTTCTTCAGCCAGAAGATCGCCGCA-AACGACCCCGAGAAAAAGAT 3154770 Query 122778 ACCCTCCACACACGCAAACGCAA 122800 ||||||||||| |||||||||| Sbjct 3154771 GCCCTCCACACAGGCAAACGCAA 3154793 >seq16 Length=836766 Score = 111 bits (122), Expect = 2e-19 Identities = 152/210 (72%), Gaps = 7/210 (3%) Strand=Plus/Plus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 || || ||| ||| || |||||||| || || || || || ||||| || ||| Sbjct 439944 GCGAAATCCGTGTGCAGGCCCTCATCGCGACTGATGAGCTCGTTGGAGAATGTGAGCCCT 440003 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 ||||||| || |||||||||| ||| | || ||| |||||| ||||||||||| || Sbjct 440004 TGCATGAGCCCGCGCTTCTTCAGCCAGAAGATTGCGGCGAATGATCCGGAGAAGAAAATG 440063 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGT-TCGGCGAAGGAGCGAGACTTTGC-ATCAA 122836 ||||||||||| |||||||||| |||||| || | |||| ||| | || || Sbjct 440064 CCCTCCACACAAGCAAACGCAATCAGGCGTATCCGGAAAGG-----GACATCGCTGGTAA 440118 Query 122837 ACCATTTCATTGCCCATTTCGCCTTCTTCT 122866 | ||||||||||| | |||||||||| Sbjct 440119 TGTACTTCATTGCCCAGTCTGCCTTCTTCT 440148 Score = 109 bits (120), Expect = 7e-19 Identities = 232/341 (68%), Gaps = 4/341 (1%) Strand=Plus/Minus Query 122481 GAGGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGAT 122540 |||||| || || | || |||||||||||| | |||| || | |||||| ||||| Sbjct 122762 GAGGAGGCGGTCGGCGACGAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAT 122703 Query 122541 GAG-GTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCA 122599 ||| | || ||||| || || | |||| | | ||| |||| |||||||| || | Sbjct 122702 GAGCGAGACG-GGGAGGGCCTCGGTCAGGAACTCCTGCTCGATCTTGACCGCCTCCTTGA 122644 Query 122600 CGATGGCGTGGATAGTTTCGGTAGTG-GGTCTATTACGCAAAGTCTTGAAGAGCTCCACG 122658 ||| || ||| || || | ||| || | || | | |||||||| | Sbjct 122643 TGATCTTGTTGATCGTGTCCGG-GTGCGGCCGGCGGCGGAGGTGCGTGAAGAGCAGGCAG 122585 Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 || || || ||| |||||||| || || || || || || || ||||| || || Sbjct 122584 GCGAAGTCGGTGTGCAGACCCTCGTCGCGCGAGATGAGCTCGTTCGAGAACGTGAGGCCG 122525 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 ||||||||||| |||||||||| ||| | || | | ||| || || |||||||||||| Sbjct 122524 GGCATGAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAACGAGCCAGAGAAGAAGATA 122465 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGA 122819 ||||| || || || || | ||||| ||| |||| || Sbjct 122464 CCCTCGACGGCGGCGAAGGCGATGAGGCGCTCGCCGAACGA 122424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031089353600