Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq8 176 5e-39 seq2 120 4e-22 seq16 114 2e-20 seq5 86.0 7e-12 >seq8 Length=2605587 Score = 176 bits (194), Expect = 5e-39 Identities = 675/1046 (65%), Gaps = 27/1046 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||||| || || ||||||| || || || ||||||| || Sbjct 1314143 CCCCAGCACATGCTCATGCGTGTCTCCGTCGGTATCCACGGTGACAACATTGAGAAGGTA 1314202 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 | ||||| ||| || ||||| | | |||| ||||| | || || |||||| Sbjct 1314203 ATCGAGACCTACAACCTCATGTCTGAGCGCTACTTCACGCACGCCTCGCCGACGCTCTTC 1314262 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 || | ||||| || |||| ||||| ||||||||| |||||| ||||| ||| Sbjct 1314263 AACTCCGGTACCCCTCACGCCCAGATGTCGTCTTGCTTCCTCGTCGCCATGAAGGATGAC 1314322 Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461 || || |||||||||| | || || | | || ||||| ||||| ||| || || Sbjct 1314323 TCGATTGACGGTATCTACGACACCCTCAAGACCTGCGCGCAGATCTCCAAGACTGCCGGT 1314382 Query 104462 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACAA 104519 ||||| || | |||||||| | | | || || |||||| ||| || || | Sbjct 1314383 GGTATCGGTCTCCACATCCACAACATTCGCGCGAAGGG--CTCGTACATCGCTGGTACCA 1314440 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | ||| | || | ||||| |||| ||||| || | | |||| || ||||| || | Sbjct 1314441 ACGGTTACTCGAACGGTATCGTTCCCATGCTCCGTGCCTACGACGCTACTGCGCGTTACG 1314500 Query 104580 TAAATCAAGCTGGGCGTCGA-AAG------GGATCTATCGCAGTCTATCTTGAGCCATGG 104632 | | || ||| | | | ||| || | | || |||| |||||||| ||| Sbjct 1314501 TTGACCA----GGGAGGCAACAAGCGCCCCGGCGCCTTTGCCATCTACCTTGAGCCCTGG 1314556 Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692 ||||| || ||| | || |||||||| | ||| ||||| || | ||||||| || Sbjct 1314557 CACGCCGACATCTTCGACTTCCTTGACCTCCGTAAGAACCACGGAAAGGAGGAGGTCCG- 1314615 Query 104693 TGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751 ||| || || || |||| ||| |||||||| | ||||||||||||||| | || ||| Sbjct 1314616 TGCTCGTGACCTGTTCTACGCCCTCTGGATCTCCGATCTCTTCATGAAGCGTGTCGAGTC 1314675 Query 104752 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGG 104811 ||| | ||| ||||| | || || | || ||||||||||| || | Sbjct 1314676 TGACGGCGACTGGACTCTCATGTGCCCCGCTGAGTGCCCTGGTCTCTCGGACGTTCACTC 1314735 Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGAC-TGCGACGG 104870 |||||||| || || ||||| | |||||| | | |||| || ||| | |||| Sbjct 1314736 CGAGGAGTTCGAGAAGCTCTACACCAGCTACGAGAAGGCAGGTAAGG-GACGTAAGACGA 1314794 Query 104871 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929 | | || | || | | ||| || || | || | || || ||||| || || Sbjct 1314795 T-CAAGGCCCAGAAGCTCTGGTTCGCCATCTTAGAGGCCCAGACTGAGACCGGCGGTCCC 1314853 Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989 | |||||| ||||| ||||| |||| ||| || || || | | || ||| Sbjct 1314854 TTCATGCTCTACAAGGACGCGGCCAACCGCAAGTCGAACCAGCAGCACCTCGGCACCATC 1314913 Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049 ||| ||||| || || || || ||| | || | | |||||| || || Sbjct 1314914 AAGTCCTCCAACCTGTGCACTGAGATCATCGAGTACTCCTCTCCTGATGAGGTTGCCGTC 1314973 Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGAT 105109 || ||||| || || ||||||||||| | || || |||| ||||| | | Sbjct 1314974 TGCAACCTTGCCTCGATCGCTCTCCCTGCCTTCGTCGACTTCGAGAACAAGACCTACAAC 1315033 Query 105110 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGAT 105169 | | || || ||||| | || || |||||||| ||||| || || || Sbjct 1315034 TTCAAGAAGCTTCACGAGATCACCAAGGTCGTCACCAAGAACCTTGACCAGGTCATCACC 1315093 Query 105170 AGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226 | || | |||||||| |||| ||||| || || || ||| | ||||| || | Sbjct 1315094 CGCAACTACTACCCCGTCCCTGAG---GCTCGCAACTCGAACATGCGTCACCGCCCCGTC 1315150 Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGA 105252 ||||||||||| |||||||| || || Sbjct 1315151 GGTCTCGGTGTCCAGGGTCTTGCCGA 1315176 >seq2 Length=3385878 Score = 120 bits (132), Expect = 4e-22 Identities = 164/224 (73%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 94723 GCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGG-TTTGA 94781 |||||| | || | || || || | ||||| || || ||||| || |||| ||| Sbjct 2876657 GCCATCGACACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCCCTGCGGTGGATTTCC 2876716 Query 94782 TACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTT 94841 || || | | | | || | ||||| ||| |||| || || |||||||||||||| Sbjct 2876717 GACCAACGCTCCT-CGTTCGGCGAGCGCCTCATCGCGTTCGCTGCCGTTGAGGGTATCTT 2876775 Query 94842 CTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 94900 |||||| || || ||| ||| | || | ||||| |||||||| || |||||||| || | Sbjct 2876776 CTTCTCAGGCTCGTTC-GCGTCCATCTTCTGGCTGAAGAAGCGCGGCCTCATGCCCGGCC 2876834 Query 94901 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 || |||||||||||||| ||||| || |||||||| |||||| Sbjct 2876835 TCACGTTCTCCAACGAGCTCATCTCGCGCGACGAGGGTCTCCAC 2876878 >seq16 Length=836766 Score = 114 bits (126), Expect = 2e-20 Identities = 110/141 (78%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 94863 ||||| ||| |||| || || || |||||||||||||||||||| || ||| | | Sbjct 122433 GAGCGCCTCATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCGTTCGCCTCC 122492 Query 94864 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 94923 || | ||||| |||||||| ||||||||||| || ||| ||||| |||||||| ||| Sbjct 122493 ATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGCCTCACGTTCTCGAACGAGCTCATC 122552 Query 94924 TCTCGTGACGAGGGACTCCAC 94944 || || |||||||| || ||| Sbjct 122553 TCGCGCGACGAGGGTCTGCAC 122573 Score = 105 bits (116), Expect = 8e-18 Identities = 150/208 (72%), Gaps = 5/208 (2%) Strand=Plus/Minus Query 94738 CCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCC 94797 || || || || ||||| || || ||||| ||||||| || || | | || || Sbjct 440158 CCCTGCATCCAGAAGAAGGCAGACTGGGCAATGAAGTACATT---ACCA-GCGATGTCCC 440103 Query 94798 TTTGCTGAG-CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 94856 ||| | || || || | || ||||| ||||| ||||| || |||||||| || || || Sbjct 440102 TTTCCGGATACGCCTGATTGCGTTTGCTTGTGTGGAGGGCATTTTCTTCTCCGGATCATT 440043 Query 94857 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 94916 | ||| || | ||||| |||||||| || ||||||| ||| ||| ||||||||||| Sbjct 440042 CGCCGCAATCTTCTGGCTGAAGAAGCGCGGGCTCATGCAAGGGCTCACATTCTCCAACGA 439983 Query 94917 GCTTATCTCTCGTGACGAGGGACTCCAC 94944 ||| ||| ||| || ||||| || ||| Sbjct 439982 GCTCATCAGTCGCGATGAGGGCCTGCAC 439955 >seq5 Length=2913187 Score = 86.0 bits (94), Expect = 7e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 9698 CCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCA 9757 |||| |||||| | ||| || ||||| | |||| || || | ||| ||| | | Sbjct 2687308 CCCATGGCATCCAACTCGTCGATGAAAATGATGGCGGGAGCCTTCTTGCGCGCGGCGGCG 2687367 Query 9758 AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 9817 ||||| || || ||||||||||| || ||||| || |||||||| | || | | || Sbjct 2687368 AAGAGGTCGCGGACACGCTTGGCACCGACACCGACGAACATCTCGTCGAACGACGAGCCG 2687427 Query 9818 GAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTA 9877 ||| | |||||| || | | ||||| || | |||||| ||||| | |||||| Sbjct 2687428 GAAGCGAACAGGAAGGGAACCTCCGCCTCACCGGCGACGGCTCGCGCGAGCATCGTCTTA 2687487 Query 9878 CCCGTACCTGGCTTACCCGCGAGGAGGGCACC 9909 || ||||| || ||| | |||||| |||| Sbjct 2687488 CCAGTACCCGGAGGACCGGTCAGGAGGACACC 2687519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259954271840