Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq16 100 2e-16 seq2 95.1 1e-14 >seq16 Length=836766 Score = 100 bits (110), Expect = 2e-16 Identities = 133/180 (74%), Gaps = 10/180 (6%) Strand=Plus/Plus Query 30114 CTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGAT---GA 30170 |||| |||||||| |||| || |||||| || | ||| ||||| | | |||| | Sbjct 554222 CTTTCGGGTTCCAAGCGCTCATGATGATACGTCGGTCCGTGGGGTTCTCCTTGATCTTGC 554281 Query 30171 GGTCCACGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTC 30228 | ||| || || ||||||||||| ||| | |||| |||||| || | || || Sbjct 554282 GAATCAC----TTCCGCGAGCTGATCCACGCCCTTGCCCGTGTAGTCGTCCTCGCAGGTG 554337 Query 30229 CGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTC 30288 | |||||| || ||||| |||| |||||||||||| ||||||||||| ||||| ||||| Sbjct 554338 CC-GTACTCCGCGCCGAAGTGCCGCCACTGGAACCCATACACCGGTCCGAGGTCGCCCTC 554396 >seq2 Length=3385878 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/214 (71%), Gaps = 11/214 (5%) Strand=Plus/Plus Query 30097 AGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGG 30156 ||||||||| | || |||| || ||||| |||| || ||| ||||| | ||| || Sbjct 3289659 AGCCATGAG-CTCAC--CTTTCGGATTCCACGCGCTCATGATAATGCGGCGGTCCGTAGG 3289715 Query 30157 GTTGTTCCTGAT---GAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTA 30213 ||| | | |||| | || ||| | |||||| || || ||| | |||| ||| Sbjct 3289716 GTTCTCCTTGATCTTGCGGATCACCTCCGC---CAGCTGGTCGACGCCCTTGCCCGTGTA 3289772 Query 30214 GTCTGCC-CTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCG 30272 ||| || | ||||| | |||||| || ||||| |||| |||||||||||||||||| | Sbjct 3289773 GTCGTCCTCGCATGTGCC-GTACTCGGCGCCGAAGTGCCGCCACTGGAACCCGTACACGG 3289831 Query 30273 GTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30306 | || ||||| ||||| |||||| ||| ||| Sbjct 3289832 GGCCGAGGTCGCCCTCCCGCCTGTGGCCGAGGCC 3289865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406309825578672