Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq13 118 9e-22 seq10 109 5e-19 seq1 102 7e-17 seq6 98.7 9e-16 seq3 93.3 4e-14 >seq13 Length=1285846 Score = 118 bits (130), Expect = 9e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27003 AAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATG 27062 || || || ||||||||| | || || ||||| || || |||||||| | || || | Sbjct 1260797 AAGACCCTCACCGGCAAGACCATCACCCTTGAGGTTGAGTCGTCCGACACCATCGACAAC 1260856 Query 27063 GTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATAC 27122 ||||| || || || ||||| |||||||| || ||||| || |||||| | || | | Sbjct 1260857 GTCAAGTCGAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAGCAGCGTCTCATCTTC 1260916 Query 27123 GCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCG 27182 || ||||| || | || ||| | ||| | ||||| |||||||| || ||||||||| Sbjct 1260917 GCTGGCAAGCAGCTCGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCG 1260976 Query 27183 ACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || | ||| | ||| | ||| | || ||||| || Sbjct 1260977 ACGCTCCATCTTGTTCTTCGTCTCCGCGGTGGAAT 1261011 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || || ||| | |||||||| || || || | || Sbjct 1261238 ATGCAGATCTTCGTCAAGACTCTTACTGGAAAGACGATTACTCTGGAGGTTGAGTCCTCG 1261297 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | ||||| || || || ||||| || || || || || || || Sbjct 1261298 GATACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAG 1261357 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || |||| || | ||| | || ||||||||| Sbjct 1261358 CAGCGCCTGATTTTCGCCGGCAAGCAGCTGGAGGATGGACGTACCCTCTCTGATTACAAC 1261417 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || |||||||| || Sbjct 1261418 ATCCAGAAGGAGTCCAC 1261434 >seq10 Length=2164251 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || |||||||| |||||| | || ||||| || || || ||||| Sbjct 2138520 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATCACTCTCGAGGTCGAGTCGTCC 2138579 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || || || ||||| || || || || ||||| || Sbjct 2138580 GACACGATCGACAATGTCAAGTTGAAGATCCAGGACAAGGAGGGGATCCCCCCCGACCAG 2138639 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| || || || | || || | || | ||||| |||||| Sbjct 2138640 CAGCGCCTGATCTTCGCTGGAAAGCAGCTCGAGGATGGACGCACGCTCTCCGACTACAAC 2138699 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | ||| | || | ||| | || ||||| || Sbjct 2138700 ATCCAGAAGGAGTCGACTCTTCATCTTGTCCTCCGTCTCCGCGGTGGAAT 2138749 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || || ||| | || ||||| || || || ||||| Sbjct 2138748 ATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACGATCACTCTCGAGGTCGAGTCGTCC 2138807 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || ||||| ||||| || ||||| || || || || Sbjct 2138808 GACACGATCGACAACGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 2138867 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| || || || | || ||| | ||| | || || |||||| Sbjct 2138868 CAGCGTCTCATTTTCGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAAC 2138927 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 2138928 ATCCAGAAGGAGTCGAC 2138944 >seq1 Length=3718887 Score = 102 bits (112), Expect = 7e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27009 CTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAA 27068 || || |||||| | || || ||||| || || | || ||| | || || | ||||| Sbjct 1833929 CTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAG 1833988 Query 27069 CAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGC 27128 || || || ||||| || ||||| || ||||| || |||||| | || | ||||||| Sbjct 1833989 TCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGC 1834048 Query 27129 AAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTA 27188 || || | || ||| | ||| |||| || |||||||| || |||||||||||| | Sbjct 1834049 AAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTC 1834108 Query 27189 CATTTGGTTTTGCGTTTGCGGGGTGG 27214 || | || | ||| |||| ||||| Sbjct 1834109 CACCTCGTCCTCCGTCTGCGTGGTGG 1834134 >seq6 Length=2834147 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27009 CTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAA 27068 || ||||| ||| | |||||||| || || || | || ||| | || || | ||||| Sbjct 1117753 CTCACCGGTAAGACCATTACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAG 1117812 Query 27069 CAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGC 27128 || || || ||||| || || || || ||||| || |||||| | || | ||||||| Sbjct 1117813 TCGAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGC 1117872 Query 27129 AAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTA 27188 || || | || ||| | || ||||||| |||||||| || |||||||||||| | Sbjct 1117873 AAGCAGCTCGAGGACGGCCGCACTCTTTCCGACTACAACATCCAGAAGGAGTCGACCCTC 1117932 Query 27189 CATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || | || | ||| | || ||||| || Sbjct 1117933 CACCTTGTCCTCCGTCTCCGTGGTGGTAT 1117961 >seq3 Length=3240826 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27009 CTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAA 27068 || ||||| ||| | || ||||| || || || | || ||| | || || | ||||| Sbjct 835154 CTCACCGGTAAGACCATCACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAG 835095 Query 27069 CAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGC 27128 || || || ||||| || || || || || || || |||||| | || | ||||||| Sbjct 835094 TCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTCATCTTCGCCGGC 835035 Query 27129 AAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTA 27188 || || | || ||| | ||| ||||||| |||||||| || |||||||||||| | Sbjct 835034 AAGCAGCTCGAGGACGGCCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCGACCCTC 834975 Query 27189 CATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || | || | ||| | || ||||| || Sbjct 834974 CACCTCGTCCTCCGTCTCCGTGGTGGTAT 834946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917769368320