Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 4e-14 seq16 82.4 7e-11 >seq2 Length=3385878 Score = 93.3 bits (102), Expect = 4e-14 Identities = 127/175 (73%), Gaps = 2/175 (1%) Strand=Plus/Plus Query 6782 TTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCG 6841 ||||| |||||||||| ||| | || | | ||| ||||||| ||| | || | Sbjct 3289675 TTCGGATTCCACGCGCTCATGATAATGCGGCGGTCCGTAGGGTTCTCCTTGATCTTGCGG 3289734 Query 6842 ATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGC-TCCCCCGATA 6900 ||||| | | ||||||||| | |||| |||| ||||| | |||| | ||| || Sbjct 3289735 ATCACCTCCGCCAGCTGGTCGACGCCCTTGCCCGTGTAGTCGTCCTCGCATGTGCCG-TA 3289793 Query 6901 CTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCC 6955 ||| || || ||||| | ||||||||||||||| || ||||| | |||||||||| Sbjct 3289794 CTCGGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCC 3289848 Score = 93.3 bits (102), Expect = 4e-14 Identities = 127/175 (73%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 34390 GGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCG 34449 |||||||||| | ||||| || ||||||||||||||| | ||||| || || ||||| || Sbjct 3289848 GGAGGGCGACCTCGGCCCCGTGTACGGGTTCCAGTGGCGGCACTTCGGCGCCGAGTA-CG 3289790 Query 34450 GGGGA-GCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACA 34508 | | |||| | ||||| |||| |||| | ||||||||| | | |||||| || Sbjct 3289789 GCACATGCGAGGACGACTACACGGGCAAGGGCGTCGACCAGCTGGCGGAGGTGATCCGCA 3289730 Query 34509 CCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAA 34563 | ||| ||||||| ||| | | || | ||| |||||||||| ||||| Sbjct 3289729 AGATCAAGGAGAACCCTACGGACCGCCGCATTATCATGAGCGCGTGGAATCCGAA 3289675 >seq16 Length=836766 Score = 82.4 bits (90), Expect = 7e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 6782 TTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCG 6841 ||||||||||| |||| ||| | ||| | || ||| |||||| ||| | || Sbjct 554224 TTCGGGTTCCAAGCGCTCATGATGATACGTCGGTCCGTGGGGTTCTCCTTGATCTTGCGA 554283 Query 6842 ATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATAC 6901 ||||| | | ||||| ||| | |||| |||| ||||| | |||| | ||| Sbjct 554284 ATCACTTCCGCGAGCTGATCCACGCCCTTGCCCGTGTAGTCGTCCTCGCAGGTGCCGTAC 554343 Query 6902 TCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTC 6954 ||||| || ||||| | |||||||||||| || ||||| || | ||||||||| Sbjct 554344 TCCGCGCCGAAGTGCCGCCACTGGAACCCATACACCGGTCCGAGGTCGCCCTC 554396 Score = 82.4 bits (90), Expect = 7e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 34391 GAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGG 34450 ||||||||| | || ||||| || |||||||||||| | ||||| || |||||||| | Sbjct 554396 GAGGGCGACCTCGGACCGGTGTATGGGTTCCAGTGGCGGCACTTCGGCGCGGAGTACGGC 554337 Query 34451 GGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACC 34510 |||| | ||||| |||| |||| | ||| ||||| | | ||||| || Sbjct 554336 ACCTGCGAGGACGACTACACGGGCAAGGGCGTGGATCAGCTCGCGGAAGTGATTCGCAAG 554277 Query 34511 TTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAA 34563 | ||| |||||| ||| || | ||| | ||| |||| ||||||||||| Sbjct 554276 ATCAAGGAGAACCCCACGGACCGACGTATCATCATGAGCGCTTGGAACCCGAA 554224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261750019520