Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq13 95.1 8e-15 seq10 91.5 1e-13 >seq13 Length=1285846 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || || || ||||| ||||| ||||| || ||||| ||| || Sbjct 1261238 ATGCAGATCTTCGTCAAGACTCTTACTGGAAAGACGATTACTCTGGAGGTTGAGTCCTCG 1261297 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | | || || || ||||| || ||| | || || || || Sbjct 1261298 GATACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAG 1261357 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || || |||||||| || ||||| || | ||| || | ||||||||| Sbjct 1261358 CAGCGCCTGATTTTCGCCGGCAAGCAGCTGGAGGATGGACGTACCCTCTCTGATTACAAC 1261417 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 1261418 ATCCAGAAGGAGTCCAC 1261434 >seq10 Length=2164251 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| || ||||||||||| || |||||||||||||| || || || | Sbjct 2138747 AATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACGATCACTCTCGAGGTCGAGTCGTC 2138806 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || || ||| ||||| || || | || || || || Sbjct 2138807 CGACACGATCGACAACGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCA 2138866 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || || || || || || || |||| ||||| | || ||||| Sbjct 2138867 GCAGCGTCTCATTTTCGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAA 2138926 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 2138927 CATCCAGAAGGAGTCGAC 2138944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009122138928