Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq16 95.1 9e-15 seq2 89.7 4e-13 >seq16 Length=836766 Score = 95.1 bits (104), Expect = 9e-15 Identities = 132/180 (73%), Gaps = 10/180 (6%) Strand=Plus/Plus Query 27380 CTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGAT---GA 27436 |||| |||||||| |||| || |||||| || | ||| ||||| | | |||| | Sbjct 554222 CTTTCGGGTTCCAAGCGCTCATGATGATACGTCGGTCCGTGGGGTTCTCCTTGATCTTGC 554281 Query 27437 GGTCCACGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTACC-CTCATGTC 27494 | ||| || || ||||||||||| ||| | |||| |||||| || | || || Sbjct 554282 GAATCAC----TTCCGCGAGCTGATCCACGCCCTTGCCCGTGTAGTCGTCCTCGCAGGTG 554337 Query 27495 CGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTC 27554 | |||||| || ||||| |||| ||| |||||||| ||||||||||| ||||| ||||| Sbjct 554338 CC-GTACTCCGCGCCGAAGTGCCGCCACTGGAACCCATACACCGGTCCGAGGTCGCCCTC 554396 >seq2 Length=3385878 Score = 89.7 bits (98), Expect = 4e-13 Identities = 152/214 (71%), Gaps = 11/214 (5%) Strand=Plus/Plus Query 27363 AGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGG 27422 ||||||||| | || |||| || ||||| |||| || ||| ||||| | ||| || Sbjct 3289659 AGCCATGAG-CTCAC--CTTTCGGATTCCACGCGCTCATGATAATGCGGCGGTCCGTAGG 3289715 Query 27423 GTTGTTCCTGAT---GAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTA 27479 ||| | | |||| | || ||| | |||||| || || ||| | |||| ||| Sbjct 3289716 GTTCTCCTTGATCTTGCGGATCACCTCCGC---CAGCTGGTCGACGCCCTTGCCCGTGTA 3289772 Query 27480 GTCTACC-CTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCG 27538 ||| || | ||||| | |||||| || ||||| |||| ||| |||||||||||||| | Sbjct 3289773 GTCGTCCTCGCATGTGCC-GTACTCGGCGCCGAAGTGCCGCCACTGGAACCCGTACACGG 3289831 Query 27539 GTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 27572 | || ||||| ||||| |||||| ||| ||| Sbjct 3289832 GGCCGAGGTCGCCCTCCCGCCTGTGGCCGAGGCC 3289865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506677609196