Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 2e-14 seq16 91.5 2e-13 >seq2 Length=3385878 Score = 95.1 bits (104), Expect = 2e-14 Identities = 140/196 (71%), Gaps = 7/196 (4%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || ||||| |||||||| || || || || || ||||| || || | |||| Sbjct 2876850 TCGTTGGAGAACGTGAGGCCGGGCATGAGGCCGCGCTTCTTCAGCCAGAAGATGGACGCG 2876791 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 || || || || ||||| || || || ||||| || || ||| | || | ||| ||| || Sbjct 2876790 AACGAGCCTGAGAAGAAGATACCCTCAACGGCAGCGAACGCGATGAGGCGCTCGCCG-AA 2876732 Query 48303 CTGGCTTCGTTGTGT-----ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAG 48357 | | ||||| || |||||||| | ||||| || ||||||||||| | || | Sbjct 2876731 CGAGGAGCGTTG-GTCGGAAATCCACCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAGG 2876673 Query 48358 GCATTGTTTCTATAGC 48373 | || || || || || Sbjct 2876672 GGATGGTGTCGATGGC 2876657 >seq16 Length=836766 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/195 (71%), Gaps = 5/195 (3%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || ||||| |||||||| || || || || || ||||| || || | ||| Sbjct 122545 TCGTTCGAGAACGTGAGGCCGGGCATGAGACCGCGCTTCTTCAGCCAGAAGATGGAGGCG 122486 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA- 48301 || || ||||| ||||| || || || ||||| || || ||| | || | ||| ||| | Sbjct 122485 AACGAGCCAGAGAAGAAGATACCCTCGACGGCGGCGAAGGCGATGAGGCGCTCGCCGAAC 122426 Query 48302 -ACTG--GCTTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGG 48358 || |||| | | ||||| || | ||||| || ||||||||||| | ||||| Sbjct 122425 GACGACCGCTTGTCCGAG-ATCCAGCGAAGCGCCCAGTCGGCCTTCTTCTTGATGCAAGG 122367 Query 48359 CATTGTTTCTATAGC 48373 || || || ||||| Sbjct 122366 GATCGTGTCGATAGC 122352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667792730240