Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq10 136 9e-27 seq13 113 1e-19 seq6 100 7e-16 seq1 89.7 1e-12 seq3 87.8 4e-12 >seq10 Length=2164251 Score = 136 bits (150), Expect = 9e-27 Identities = 164/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||||||||||||||| ||||| || ||||||||||| |||| | || | Sbjct 2138738 GAGACGGAGGACAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCG 2138679 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 ||||| || || ||||| || |||||||| || | ||||||||| | | ||| || Sbjct 2138678 TCCATCCTCGAGCTGCTTT--CCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATCCCC 2138621 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || || || || |||||| | || | |||| || ||| || || ||| Sbjct 2138620 TCCTTGTCCTGGATCTTCAACTTGACATTGTCGATCGTGTCGGACGACTCGACCTCGAGA 2138561 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || |||||||| ||||||| |||||| Sbjct 2138560 GTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 2138520 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || || ||||| || ||||||||||| || | | || | || || Sbjct 2138959 AGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 2138900 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || ||||| || || | ||||||||| | | || || ||||| || Sbjct 2138899 TCGAGCTGCTTACCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 2138840 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || || | || | |||| || ||| || || ||||| || || Sbjct 2138839 TGAATCTTCGACTTCACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATCGTC 2138780 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || |||||||| ||||||||||||| ||||||| Sbjct 2138779 TTACCCGTGAGGGTCTTCACGAAGATCTGCATT 2138747 >seq13 Length=1285846 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || ||||| ||||| || |||||||||||||| | | || | ||||| Sbjct 1261449 AGGACGAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGAGAGGGTACGTCCATCC 1261390 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || |||||||| || || | ||||||||||| | || || ||||| || Sbjct 1261389 TCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 1261330 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| | || | | | || || ||| || || |||||||| || Sbjct 1261329 TGGATCTTCGACTTGACGTTGTCGATGGTATCCGAGGACTCAACCTCCAGAGTAATCGTC 1261270 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || |||||||| ||||||| |||||| Sbjct 1261269 TTTCCAGTAAGAGTCTTGACGAAGATCTGCAT 1261238 Score = 109 bits (120), Expect = 1e-18 Identities = 155/216 (72%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| ||||| || || || ||||| || ||||||||||| || | | ||| | ||||| Sbjct 1261222 GAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTACGACCATC 1261163 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 || || ||||| |||||||| || || | ||||||||||| | || || ||||| Sbjct 1261162 CTCGAGCTGCTTT--CCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTG 1261105 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || ||||| || ||||| | || | |||| || ||| || ||||| || || Sbjct 1261104 TCCTGAATCTTGCTCTTGACGTTGTCAATCGTGTCCGAGGACTCAACCTCAAGCGTGATC 1261045 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || |||||||| | ||||| || |||| ||||||| Sbjct 1261044 GTCTTGCCCGTCAACGTCTTGACAAAGATCTGCATT 1261009 Score = 100 bits (110), Expect = 7e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || |||||||| || || ||||| || ||||||||||| |||| | || | || || Sbjct 1260993 AGAACAAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCC 1260934 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| || | ||||||||| | | ||| |||||||| || Sbjct 1260933 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCC 1260874 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| | || | | |||| || ||| || ||||| || || || Sbjct 1260873 TGGATCTTCGACTTGACGTTGTCGATGGTGTCGGACGACTCAACCTCAAGGGTGATGGTC 1260814 Query 152073 TTGCCCGTGAGAGTCTTC 152090 ||||| ||||| |||||| Sbjct 1260813 TTGCCGGTGAGGGTCTTC 1260796 >seq6 Length=2834147 Score = 100 bits (110), Expect = 7e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||||||||| || || || ||||| || ||||||||||| |||| | ||| | Sbjct 1117950 GAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCG 1117891 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || ||||||||||| || | ||||||||| | | ||| || || Sbjct 1117890 GCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATACCCTC 1117831 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| | || | | |||| || ||| || || ||||| Sbjct 1117830 CTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGT 1117771 Query 152066 AATAGTTTTGCCCGTGAG 152083 ||| || || || ||||| Sbjct 1117770 AATGGTCTTACCGGTGAG 1117753 >seq1 Length=3718887 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || || || || ||||| || ||||||||||| || | | || | || || Sbjct 1834120 GAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTC 1834061 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | ||||||||| | | ||| || ||||| || Sbjct 1834060 CTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTC 1834001 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| | || | | |||| || ||| || ||||| || || || Sbjct 1834000 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGT 1833941 Query 152072 TTTGCCCGTGAG 152083 ||||||||||| Sbjct 1833940 CTTGCCCGTGAG 1833929 >seq3 Length=3240826 Score = 87.8 bits (96), Expect = 4e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || || || ||||| || ||||||||||| |||| | || | Sbjct 834957 GAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCG 835016 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || ||||||||||| || | ||||||||| | | ||| || || Sbjct 835017 GCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTC 835076 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| | || | | |||| || ||| || || ||||| Sbjct 835077 CTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGT 835136 Query 152066 AATAGTTTTGCCCGTGAG 152083 || || || || ||||| Sbjct 835137 GATGGTCTTACCGGTGAG 835154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153819085133836