Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq13 174 3e-38 seq10 161 2e-34 seq3 161 2e-34 seq6 152 1e-31 seq1 147 5e-30 seq4 129 1e-24 seq2 89.7 1e-12 seq16 84.2 5e-11 >seq13 Length=1285846 Score = 174 bits (192), Expect = 3e-38 Identities = 178/230 (77%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | ||| || || |||||||||||||||| Sbjct 1261237 ACCACCACGCAGGCGGAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 1261178 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || |||||||| || || || ||||| || |||| || || ||||| || Sbjct 1261177 GAGAGTACGACCATCCTCGAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGG 1261118 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||||||||||||||| || ||||| ||| || ||| | || || |||||||| | || | Sbjct 1261117 AATACCCTCCTTGTCCTGAATCTT-GCTCTTGACGTTGTCAATCGTGTCCGAGGACTCAA 1261059 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 | || || ||||||||||| |||||||| ||||| || || ||||||||| Sbjct 1261058 CCTCAAGCGTGATCGTCTTGCCCGTCAACGTCTTGACAAAGATCTGCATT 1261009 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| |||||||| ||||| || || || | ||| || || ||||||||||| |||| Sbjct 1261465 ACCTCCACGCAGACGAAGGACGAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGA 1261406 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || |||||||| || || || ||||| || |||| || || ||||| || Sbjct 1261405 GAGGGTACGTCCATCCTCCAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGG 1261346 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| |||||||| | || ||| | ||||| || ||||| | || || Sbjct 1261345 AATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCCGAGGACTCAAC 1261286 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| |||||||| || || | |||||| ||||| |||||||| Sbjct 1261285 CTCCAGAGTAATCGTCTTTCCAGTAAGAGTCTTGACGAAGATCTGCAT 1261238 Score = 125 bits (138), Expect = 1e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || ||||| || ||||| | ||| || || |||||||||||||| | Sbjct 1261008 CCACCGCGGAGACGAAGAACAAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 1260949 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| || || || || || ||||| | ||| || ||||| || Sbjct 1260948 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGG 1260889 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| |||||||| | || ||| | ||||| ||||| || | || || Sbjct 1260888 ATGCCTTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGGACGACTCAACC 1260829 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTT 283084 || || ||||| ||||| || || | ||||| Sbjct 1260828 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTT 1260797 >seq10 Length=2164251 Score = 161 bits (178), Expect = 2e-34 Identities = 151/192 (79%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || |||||||||||||| | || |||||||| ||||| || || || || || || Sbjct 2138938 TCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAA 2138879 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | ||| || |||||| ||||| ||||||||||| || ||||| | || ||| | Sbjct 2138878 ATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTCACGTTG 2138819 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| || | ||||| ||||||||||||||||||||||| | ||||| ||| Sbjct 2138818 TCGATCGTGTCGGACGACTCGACCTCGAGAGTGATCGTCTTACCCGTGAGGGTCTTCACG 2138759 Query 283089 AATATCTGCATT 283100 || ||||||||| Sbjct 2138758 AAGATCTGCATT 2138747 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || || || || ||||| | || || || |||||||||||||| | Sbjct 2138746 CCACCGCGGAGACGGAGGACAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAG 2138687 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| |||||||| || || || || || ||||||| || || ||||| || Sbjct 2138686 AGCGTGCGTCCATCCTCGAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 2138627 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| || || | ||||| ||||| || | ||||| Sbjct 2138626 ATCCCCTCCTTGTCCTGGATCTTCAACTTGACATTGTCGATCGTGTCGGACGACTCGACC 2138567 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||||||| ||||| || |||| |||||| ||||| |||||||| Sbjct 2138566 TCGAGAGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 2138520 Score = 109 bits (120), Expect = 1e-18 Identities = 122/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 ||||||||| ||| || || |||||||| || || || || |||||||| | ||| || | Sbjct 2138414 TGTAGTCAGAAAGGGTACGACCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCT 2138355 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 |||| || || ||||||||||| || ||||| | || ||| | || || ||||| | Sbjct 2138354 GGTCGGGGGGGATCCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCAG 2138295 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTT 283084 | | ||||| ||||| ||||| ||||| || || | ||||| Sbjct 2138294 ACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGCGTCTT 2138252 >seq3 Length=3240826 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | || || || |||||||||||||| | Sbjct 834948 ACCACCACGGAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 835007 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| || || || ||||| ||||| | ||| || |||||| || Sbjct 835008 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGAGG 835067 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || ||| | ||||| |||||||| | ||||| Sbjct 835068 GATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGAC 835127 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 ||||||||||| |||||||| || Sbjct 835128 CTCGAGAGTGATGGTCTTACCGGT 835151 >seq6 Length=2834147 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | || || || |||||||||||||| | Sbjct 1117959 ACCACCACGGAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 1117900 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| || || || ||||| ||||| | ||| || ||||| || Sbjct 1117899 AAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGG 1117840 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || ||| | ||||| |||||||| | ||||| Sbjct 1117839 GATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGAC 1117780 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 |||||||| || |||||||| || Sbjct 1117779 CTCGAGAGTAATGGTCTTACCGGT 1117756 Score = 91.5 bits (100), Expect = 3e-13 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 273778 TCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACT 273837 ||||||||||||| | |||||||| |||||| ||||| ||||| | | ||| |||| Sbjct 2630525 TCGTGAAAATGTAACGAGCACTCGCCGCGTCCTTACCACCCTGCAGACGAGTACCGAACT 2630584 Query 273838 GACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCA 273897 |||| | |||| ||| |||| | ||||||||||||||| | |||||| | | | Sbjct 2630585 GACCGTTGGGCGAGAGCAAGTTGACATTGTTGCTACCGACGAAGCTCTGAGCAAGAGAGA 2630644 Query 273898 CGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGC 273937 |||| ||| | || || | || |||||||| || || Sbjct 2630645 CGATCGTCGAGTAGAGCGAAGCTTCACCGTGGTGGTAAGC 2630684 >seq1 Length=3718887 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || || || | || || || |||||||||||||| | Sbjct 1834135 ACCACCACGCAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 1834076 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| || || || ||||| ||||| | ||| || ||||| || Sbjct 1834075 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGG 1834016 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || ||| | ||||| |||||||| | ||||| Sbjct 1834015 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGACTCGAC 1833956 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| ||||| ||||| Sbjct 1833955 CTCAAGGGTGATGGTCTTGCCCGT 1833932 >seq4 Length=3236612 Score = 129 bits (142), Expect = 1e-24 Identities = 121/154 (79%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 ||||||||| ||| ||||| |||||||| || || || ||||| ||||| | || || | Sbjct 326235 TGTAGTCAGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCT 326294 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 |||| ||| || ||||||||||| |||||||| | || ||| | ||||| ||||||| Sbjct 326295 GGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTAACGTTGTCGATCGTGTCCG 326354 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 | | ||||| |||||||| || ||||| ||||| Sbjct 326355 AGGACTCGACCTCGAGAGTAATGGTCTTGCCCGT 326388 >seq2 Length=3385878 Score = 89.7 bits (98), Expect = 1e-12 Identities = 534/840 (64%), Gaps = 23/840 (3%) Strand=Plus/Plus Query 229560 TGGGATATGTATAAGAAGGCGGTGGCAACCTTTTGGACCACGGAGGAAGTCCCCCTAAAT 229619 ||| | ||||| |||||||| ||| | || |||||| | ||||| || ||| Sbjct 2876339 TGGCAGATGTACAAGAAGGCTCAGGCTTCGTTCTGGACCGCCGAGGAGATCAACCTCGCC 2876398 Query 229620 GCAGACGTCGTCGACTGGCGCGAGAAACTCAACGACGATGAACGCCATTTCATCAAGCAC 229679 | ||| || ||||||| | | || || |||||| |||| ||| |||||| ||||| Sbjct 2876399 CCCGACCTCCACGACTGGGACAACAAGCTGAACGACAATGAGCGCTTCTTCATCGAGCAC 2876458 Query 229680 ATTCTCGGGTTTTTTGCAGGTTCCGACGGTATCGTGATGGAAAACTTGCAGACTAACTTC 229739 | |||| ||| || || | || || || ||||| | |||||| | | |||| Sbjct 2876459 GTCCTCGCGTTCTTCGCCGCGTCGGATGGCATCGTCAACGAAAACCTCGTGGAGCGCTTC 2876518 Query 229740 AGCGTCGAAGTAACGGTCCCAGAGGCACGGCAGTTTTACGCATACCAGACGTTCAATGAA 229799 ||| ||| || | || | ||||| | ||| |||| | ||||| | | || Sbjct 2876519 TGCGGCGAGGTCCAGATCTCCGAGGCCAAGACGTTCTACGGTTTCCAGATCATGATGGAG 2876578 Query 229800 TCTGTTCATTCGGAACAGTATGCCCTTCTTATTGACGCGCTCATTTCCGACGAGCGAGAG 229859 | |||||||| ||| | || || || ||| || ||| |||| | || | | Sbjct 2876579 AACATCCATTCGGAGACGTACTCGCTCCTCATCGACACGTACATCCGCGACAA-CGCGCG 2876637 Query 229860 CGTGCCGAAC-TGTTCGACGCCATCGAAAACATCCCGGCGGTCCATAACAAAGCGCGTTG 229918 | | | | ||||| | |||||||| | |||||| || | || || || || Sbjct 2876638 CCGCCAGTTCCTGTTCCAGGCCATCGACACCATCCCCTGCATCAAGAAGAAGGCCGACTG 2876697 Query 229919 GGCTCAGAAGTGGCTGGA--ACCCA-GTAAATCGTTTGCAGAGCGTCTCGTCGCGTGGGT 229975 ||| | | |||| | ||| | | ||||| | ||||| ||| |||||| | Sbjct 2876698 GGCCCTGCGGTGGATTTCCGACCAACGCTCCTCGTTCGGCGAGCGCCTCATCGCGTTCGC 2876757 Query 229976 GTGCGTTGAGGGTATTCTGTTCTCCGGGAGTTTCTGCG-CCATCTTTTGGCTACGCAACA 230034 |||||||||||| | ||||| || ||| ||| ||||||| ||||| || | Sbjct 2876758 TGCCGTTGAGGGTATCTTCTTCTCAGGCTCGTTC-GCGTCCATCTTCTGGCTG---AAGA 2876813 Query 230035 AGGGCG---TCATGCCCGGGCTCGGTCTGTCGAACGAATTCATCAGCAGGGACGAAGGTC 230091 || ||| |||||||||| ||| | || ||||| ||||| | ||||| |||| Sbjct 2876814 AGCGCGGCCTCATGCCCGGCCTCACGTTCTCCAACGAGCTCATCTCGCGCGACGAGGGTC 2876873 Query 230092 TTCACCAGCAATTTGGCGAGGTCTTGTATTCGAAGCTAAATAACAAAC--TACCTTTC-- 230147 | ||| | | | || || | || | ||| | | | | | | || | Sbjct 2876874 TCCAC-ACCGACTTCGCCTGC-CTGCTCTTC--ACCCACCTCCGCCGCCGTCCCCACCCG 2876929 Query 230148 GAAACGGTGAAACAAATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGAC 230207 || ||| | || | ||| ||| || | || | ||| |||||||| | ||| Sbjct 2876930 GACACGATCAACAAGATCATCAAGGAGGCCGTCAAGATTGAGCAGGAGTTCCTCACCGAG 2876989 Query 230208 GCTATTCCT-TGCCGTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATT 230266 || | || || || || ||||||||||| || | |||||| | || || ||||| || Sbjct 2876990 GCCCTCCCGGTGTCG-CTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTT 2877048 Query 230267 CGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCC 230326 ||| || || ||| | |||| || || || |||| || | | ||||| ||||| Sbjct 2877049 CGTCGCCGACCGTCTCCTCGTCGCCCTTGGCAACGACAAGATCTGGAACTCGGCCAACCC 2877108 Query 230327 CTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGT 230386 ||||| || |||||| | || || || || || || | ||||||||||| |||||| Sbjct 2877109 CTTCGACTTCATGGAGATGATCTCGCTGCAAGGCAAGGCCAACTTCTTCGAGTCGCGTGT 2877168 >seq16 Length=836766 Score = 84.2 bits (92), Expect = 5e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || ||||||||||| || | |||||| | || || || || ||||| || || || | Sbjct 122700 CTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACATTGAGTTCGTCGCCGACCGCCTC 122759 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||| || || || |||| || | | ||||| |||||||||| || |||||| Sbjct 122760 CTCGTCGCCCTCGGCAACGACAAGCTCTGGAACTCGTCCAACCCCTTCGACTTCATGGAG 122819 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGT 230386 | || || |||||||| || | ||||||||||| |||||| Sbjct 122820 ATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCGAGTCGCGTGT 122863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737644283864