Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq10 143 2e-29 seq13 138 8e-28 seq6 111 1e-19 seq3 111 1e-19 seq1 98.7 7e-16 >seq10 Length=2164251 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| ||||| |||||| ||||||||||| || | ||| ||| |||| || Sbjct 2138956 ACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCG 2138897 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || || | ||||||||| || | ||| | || ||||| ||| Sbjct 2138896 AGCTGCTTACCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGA 2138837 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | || ||||||| || || ||||| | || |||||||| Sbjct 2138836 ATCTTCGACTTCACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATCGTCTTA 2138777 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||||||||||||||| ||||| Sbjct 2138776 CCCGTGAGGGTCTTCACGAAGATCTGCAT 2138748 Score = 114 bits (126), Expect = 9e-21 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| || |||||| ||||||||||| |||| ||| ||| | || || Sbjct 2138728 ACAAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGTCCATCCTCG 2138669 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||||| |||||||| || | || | || ||||| ||| Sbjct 2138668 AGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATCCCCTCCTTGTCCTGG 2138609 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | || ||||||| || || ||||| | || || |||| Sbjct 2138608 ATCTTCAACTTGACATTGT--CGATCGTGTCGGACGACTCGACCTCGAGAGTGATGGTCT 2138551 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || || ||||| |||||||| ||||| Sbjct 2138550 TGCCAGTCAGAGTCTTGACGAAGATCTGCAT 2138520 >seq13 Length=1285846 Score = 138 bits (152), Expect = 8e-28 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| |||||| |||||||||||||| | ||| || | || ||| Sbjct 1261446 ACGAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGAGAGGGTACGTCCATCCTCC 1261387 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| || |||| |||||||| || | || | ||| ||||| ||| Sbjct 1261386 AGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGG 1261327 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | ||||| || | ||| || ||||||| |||||||||||| Sbjct 1261326 ATCTTCGACTTGACGTTGTCGATGGTATCCGAGGACTCAACCTCCAGAGTAATCGTCTTT 1261267 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||| |||||||| ||||| Sbjct 1261266 CCAGTAAGAGTCTTGACGAAGATCTGCAT 1261238 Score = 118 bits (130), Expect = 8e-22 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || ||||| |||||| ||||||||||| |||| || ||| |||| || Sbjct 1260990 ACAAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCG 1260931 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | ||||||||| || | ||| | |||||||| ||| Sbjct 1260930 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGG 1260871 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | |||||||||| || || ||||| | || || ||||| Sbjct 1260870 ATCTTCGACTTGACGTTGTCGATGGTGTCGGACGACTCAACCTCAAGGGTGATGGTCTTG 1260811 Query 44309 CCCGTGAGGGTCTTC 44323 || |||||||||||| Sbjct 1260810 CCGGTGAGGGTCTTC 1260796 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| |||||| ||||||||||| || | ||| || | || || Sbjct 1261218 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTACGACCATCCTCG 1261159 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| || |||| |||||||| || | || | ||| ||||| ||| Sbjct 1261158 AGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGA 1261099 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||| | ||| || ||||| | ||| |||||||| Sbjct 1261098 ATCTTGCTCTTGACGTTGTCAATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTTG 1261039 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | ||||| || ||||| ||||| Sbjct 1261038 CCCGTCAACGTCTTGACAAAGATCTGCAT 1261010 >seq6 Length=2834147 Score = 111 bits (122), Expect = 1e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||| ||||||||||| |||| || ||| |||| || Sbjct 1117940 ACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCG 1117881 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | ||||||||| || | || | ||| ||||| ||| Sbjct 1117880 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGG 1117821 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | |||||||| | ||| || ||||| | ||||| ||||| Sbjct 1117820 ATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTAATGGTCTTA 1117761 Query 44309 CCCGTGAGG 44317 || |||||| Sbjct 1117760 CCGGTGAGG 1117752 >seq3 Length=3240826 Score = 111 bits (122), Expect = 1e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||| ||||||||||| |||| || ||| |||| || Sbjct 834967 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCCTCG 835026 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | ||||||||| || | ||| | ||| ||||| ||| Sbjct 835027 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGG 835086 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | |||||||| | ||| || ||||| | || || ||||| Sbjct 835087 ATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTA 835146 Query 44309 CCCGTGAGG 44317 || |||||| Sbjct 835147 CCGGTGAGG 835155 >seq1 Length=3718887 Score = 98.7 bits (108), Expect = 7e-16 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||| ||||||||||| || | || ||| |||| || Sbjct 1834116 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 1834057 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | ||||||||| || | || | || ||||| ||| Sbjct 1834056 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 1833997 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||| | ||| || ||||| | || || ||||| Sbjct 1833996 ATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTG 1833937 Query 44309 CCCGTGAGG 44317 ||||||||| Sbjct 1833936 CCCGTGAGG 1833928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989891063572